Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_0476 |
Symbol | |
ID | 4205493 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | + |
Start bp | 566372 |
End bp | 567655 |
Gene Length | 1284 bp |
Protein Length | 427 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642565033 |
Product | ABC transporter, substrate-binding protein |
Protein accession | YP_697804 |
Protein GI | 110802208 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAAAGGG GATTGAGAAA TATTATTGCT ATGACATTAG CAACATTCAC AGTAGGAAGT TTTTTAACTG CATGTGGAAA TGATAATTTA AAGAGTGGGA ATAGTAGTGA TGGAAATGTT ATTTTAACAT ATAGTATTTG GGATAAAGGG CAAGAGCCAG CTATGAGAGC TATTGCTGAT GCTTTTGAAA AAGAGAATCC TAATATAAAA ATAAATGTTG AAATAACTCC ATGGGATCAA TATTGGATGA AAATGGATGC AGCTGCTCAG GGGGGAGCTT TGCCAGATAT TTTTTGGATG CATTCTAGCC AAATAAGTAG ATATGGCAGG AATGGGAAGC TTTTAGATTT AACAGATAGA ATAAAGAATA GTAAAAAAAT TAATTTAAAT AATTATCCAG AAGGATTAGT AGAATTATAT TCACCAGACA ATAAAAACTA TGCTATTCCT AAGGATTATG ATACAACAGC ACTTTGGTAT AATAAGGCTT TGTTTGATGA GGCAGGAATT CCTTATCCAG ATGAAACTTG GACTTGGGAT ACTTTATTAG AAACGGCAAA AAAACTTACT AATAAGGAAA ATAAGATATA TGGATTTGGA GCACCATTAA ATAGTCATGA GGGTTATTAC AACTTCATAT TTCAAAATGG TGGATATATA TTATCTGATG ATAAGAAAAA ATGTGGATAT GATGATAAAA AAACTTTAGA AGCACTTAGA TGGTATATTG ATTTAGGACT TAAGGAAGGA GTATCACCAA CTCAAAAGGA ATTTGATGAG GTTTCTCCTT TAACTTTATT TGAATCAGGA AAATTAGCAA TGGGAATTTT TGGTTCATGG AATGTAGCAA ATTTTAAGCA AAATGAATAT GTAAGAGAAA ATTGTGATAT TGCAGTTCTT CCAATGGGAG AAAAGAGAGC TAGTGTTTAT AATGGATTAG GAAATGCTAT TGGCTATAAT ACTAAGCATC CTGAAGAAGC ATGGAAATTT GTTGAATTTC TAGGTGGAAA AGAAGCTAAT ATTTTACAAG CTGAGTATGG AGCAGCAATA CCAGCTTATA AAGGAATTGA TGAGAAATGG GCTGAAGTAA CTAAGGAATT TAATGCTAGG GCACATGTTG AGATGTTAGA TTATGCAGAG ATATTACCTT ATTCCAATAG AACTGCTAGA TGGAAAGTAA TTGAGGATGA TCTTTGGCCA AGAGTTTGGG CTGGACAAGC AAATTTAGAT GAGGTTTCTA AGAGAATGGA CAAAGATATA GAAGAAGTTT TGGCTGAGGA TTAA
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Protein sequence | MKRGLRNIIA MTLATFTVGS FLTACGNDNL KSGNSSDGNV ILTYSIWDKG QEPAMRAIAD AFEKENPNIK INVEITPWDQ YWMKMDAAAQ GGALPDIFWM HSSQISRYGR NGKLLDLTDR IKNSKKINLN NYPEGLVELY SPDNKNYAIP KDYDTTALWY NKALFDEAGI PYPDETWTWD TLLETAKKLT NKENKIYGFG APLNSHEGYY NFIFQNGGYI LSDDKKKCGY DDKKTLEALR WYIDLGLKEG VSPTQKEFDE VSPLTLFESG KLAMGIFGSW NVANFKQNEY VRENCDIAVL PMGEKRASVY NGLGNAIGYN TKHPEEAWKF VEFLGGKEAN ILQAEYGAAI PAYKGIDEKW AEVTKEFNAR AHVEMLDYAE ILPYSNRTAR WKVIEDDLWP RVWAGQANLD EVSKRMDKDI EEVLAED
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