More than 300 homologs were found in PanDaTox collection
for query gene Sked_05420 on replicon NC_013521
Organism: Sanguibacter keddieii DSM 10542



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Replicon accession
Locus tag
Product
% identity
Alignment on query gene
Alignment on homolog gene
Length
Bit score

E-value
Organism name
Kingdom
Plasmid clonability
Plasmid unclonability p-value
Fosmid clonability
Fosmid unclonability p-value
Coverage Plot
PanDaTox homologs
Experimental validation
NC_013521  Sked_05420  ABC-type sugar transport system, periplasmic component  100 
 
 		 438 aa  892    Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0143899  normal  1 
 
 
-
 
NC_013530  Xcel_0897  extracellular solute-binding protein family 1  53.12 
 
 		 446 aa  456  1e-127  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0316444  n/a   
 
 
-
 
NC_008541  Arth_3324  extracellular solute-binding protein  44.32 
 
 		 427 aa  358  9.999999999999999e-98  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000420771  n/a   
 
 
-
 
NC_011886  Achl_3124  extracellular solute-binding protein family 1  42.6 
 
 		 429 aa  353  2.9999999999999997e-96  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0621948 
 
 
-
 
NC_013521  Sked_03450  ABC-type sugar transport system, periplasmic component  43.6 
 
 		 416 aa  348  9e-95  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.355174 
 
 
-
 
NC_013521  Sked_05230  ABC-type sugar transport system, periplasmic component  32.14 
 
 		 450 aa  191  2.9999999999999997e-47  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.808581  normal  1 
 
 
-
 
NC_008541  Arth_0780  extracellular solute-binding protein  30.77 
 
 		 436 aa  184  2.0000000000000003e-45  Arthrobacter sp. FB24  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_2036  extracellular solute-binding protein family 1  28.67 
 
 		 439 aa  184  2.0000000000000003e-45  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.182591  normal  0.899466 
 
 
-
 
NC_011886  Achl_0895  extracellular solute-binding protein family 1  30.69 
 
 		 436 aa  181  2e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.441999 
 
 
-
 
NC_011886  Achl_3119  extracellular solute-binding protein family 1  29.44 
 
 		 428 aa  181  2.9999999999999997e-44  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013093  Amir_0970  extracellular solute-binding protein family 1  28.54 
 
 		 428 aa  178  2e-43  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_008541  Arth_3326  extracellular solute-binding protein  30.32 
 
 		 453 aa  170  4e-41  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00000398294  n/a   
 
 
-
 
NC_011886  Achl_3128  extracellular solute-binding protein family 1  28.61 
 
 		 450 aa  164  2.0000000000000002e-39  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0477771 
 
 
-
 
NC_013530  Xcel_2537  extracellular solute-binding protein family 1  28.57 
 
 		 450 aa  164  3e-39  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.272028  n/a   
 
 
-
 
NC_013172  Bfae_29740  ABC-type sugar transport system, periplasmic component  31.23 
 
 		 437 aa  162  8.000000000000001e-39  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_008541  Arth_1126  extracellular solute-binding protein  27.05 
 
 		 432 aa  158  1e-37  Arthrobacter sp. FB24  Bacteria  normal  0.190587  n/a   
 
 
-
 
NC_011661  Dtur_0437  extracellular solute-binding protein family 1  26.02 
 
 		 424 aa  158  2e-37  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000010114  n/a   
 
 
-
 
NC_007333  Tfu_1702  sugar-binding protein  26.89 
 
 		 442 aa  157  3e-37  Thermobifida fusca YX  Bacteria  normal  0.981171  n/a   
 
 
-
 
NC_011988  Avi_5580  ABC transporter/Periplasmic pectin oligomer binding protein  25.46 
 
 		 427 aa  157  3e-37  Agrobacterium vitis S4  Bacteria  normal  1  n/a   
 
 
-
 
NC_009636  Smed_3329  extracellular solute-binding protein  25.46 
 
 		 428 aa  157  4e-37  Sinorhizobium medicae WSM419  Bacteria  normal  0.955635  normal  0.757839 
 
 
-
 
NC_014210  Ndas_1049  extracellular solute-binding protein family 1  27 
 
 		 437 aa  153  5e-36  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  0.340866 
 
 
-
 
NC_009664  Krad_0589  extracellular solute-binding protein family 1  27.03 
 
 		 452 aa  152  8e-36  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.289831  normal  0.0417818 
 
 
-
 
NC_012669  Bcav_0919  extracellular solute-binding protein family 1  26.78 
 
 		 441 aa  152  8.999999999999999e-36  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_012850  Rleg_4335  extracellular solute-binding protein family 1  26.16 
 
 		 428 aa  150  3e-35  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  1  hitchhiker  0.000444207 
 
 
-
 
NC_012669  Bcav_1534  extracellular solute-binding protein family 1  28.57 
 
 		 436 aa  147  3e-34  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.191711  decreased coverage  0.00957964 
 
 
-
 
NC_011886  Achl_1199  extracellular solute-binding protein family 1  27.25 
 
 		 432 aa  145  2e-33  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000829014 
 
 
-
 
NC_013172  Bfae_29730  ABC-type sugar transport system, periplasmic component  28.8 
 
 		 434 aa  144  3e-33  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_012669  Bcav_3899  extracellular solute-binding protein family 1  27.63 
 
 		 435 aa  142  9.999999999999999e-33  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009620  Smed_3578  extracellular solute-binding protein  24.7 
 
 		 428 aa  141  3e-32  Sinorhizobium medicae WSM419  Bacteria  normal  0.608798  normal  1 
 
 
-
 
NC_011369  Rleg2_4006  extracellular solute-binding protein family 1  25.26 
 
 		 428 aa  139  7.999999999999999e-32  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008541  Arth_3329  extracellular solute-binding protein  26.89 
 
 		 431 aa  139  8.999999999999999e-32  Arthrobacter sp. FB24  Bacteria  normal  0.0332045  n/a   
 
 
-
 
NC_012669  Bcav_3557  extracellular solute-binding protein family 1  25.73 
 
 		 458 aa  135  1.9999999999999998e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013205  Aaci_2460  extracellular solute-binding protein family 1  24.94 
 
 		 441 aa  134  3e-30  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.372805  n/a   
 
 
-
 
NC_011886  Achl_0499  extracellular solute-binding protein family 1  26.4 
 
 		 434 aa  133  5e-30  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000057577 
 
 
-
 
NC_012669  Bcav_0806  extracellular solute-binding protein family 1  27.18 
 
 		 437 aa  132  7.999999999999999e-30  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.0510551 
 
 
-
 
NC_013517  Sterm_0697  extracellular solute-binding protein family 1  25.22 
 
 		 433 aa  132  1.0000000000000001e-29  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_3131  extracellular solute-binding protein family 1  26 
 
 		 422 aa  130  5.0000000000000004e-29  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00803878 
 
 
-
 
NC_012669  Bcav_0793  extracellular solute-binding protein family 1  26.8 
 
 		 442 aa  129  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.0145438 
 
 
-
 
NC_012850  Rleg_4344  extracellular solute-binding protein family 1  24.93 
 
 		 428 aa  127  4.0000000000000003e-28  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0302279  hitchhiker  0.00000351134 
 
 
-
 
NC_011369  Rleg2_4015  extracellular solute-binding protein family 1  25.9 
 
 		 428 aa  126  7e-28  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.946152  normal  1 
 
 
-
 
NC_013517  Sterm_4040  extracellular solute-binding protein family 1  26.26 
 
 		 434 aa  125  1e-27  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013530  Xcel_2647  extracellular solute-binding protein family 1  28.99 
 
 		 446 aa  125  2e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.890591  n/a   
 
 
-
 
NC_009664  Krad_2228  extracellular solute-binding protein family 1  25.75 
 
 		 460 aa  122  9.999999999999999e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  0.754729 
 
 
-
 
NC_012034  Athe_2081  extracellular solute-binding protein family 1  26.76 
 
 		 434 aa  115  2.0000000000000002e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.159947  n/a   
 
 
-
 
NC_012912  Dd1591_1966  extracellular solute-binding protein family 1  25.79 
 
 		 430 aa  108  2e-22  Dickeya zeae Ech1591  Bacteria  normal  0.810983  n/a   
 
 
-
 
NC_012880  Dd703_2037  extracellular solute-binding protein family 1  24.93 
 
 		 430 aa  106  8e-22  Dickeya dadantii Ech703  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_4051  extracellular solute-binding protein family 1  22.5 
 
 		 434 aa  102  1e-20  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_009654  Mmwyl1_0777  extracellular solute-binding protein  25.66 
 
 		 428 aa  101  3e-20  Marinomonas sp. MWYL1  Bacteria  normal  1  normal  1 
 
 
-
 
NC_010001  Cphy_3402  extracellular solute-binding protein  23.63 
 
 		 451 aa  101  3e-20  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000236647  n/a   
 
 
-
 
NC_009436  Ent638_3292  extracellular solute-binding protein  24.87 
 
 		 428 aa  98.2  3e-19  Enterobacter sp. 638  Bacteria  normal  1  normal  0.309737 
 
 
-
 
NC_013421  Pecwa_2197  extracellular solute-binding protein family 1  24.13 
 
 		 429 aa  97.8  4e-19  Pectobacterium wasabiae WPP163  Bacteria  normal  0.700843  n/a   
 
 
-
 
NC_012917  PC1_1904  extracellular solute-binding protein family 1  25.43 
 
 		 429 aa  97.4  4e-19  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.172949  n/a   
 
 
-
 
NC_013517  Sterm_4050  extracellular solute-binding protein family 1  24.03 
 
 		 433 aa  97.4  5e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013517  Sterm_3784  extracellular solute-binding protein family 1  24.08 
 
 		 430 aa  93.2  7e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  1  n/a   
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  32.29 
 
 		 430 aa  93.6  7e-18  Brachybacterium faecium DSM 4810  Bacteria  normal  1  n/a   
 
 
-
 
NC_010159  YpAngola_A2648  oligogalacturonide ABC transporter periplasmic oligogalacturonide-binding protein  23.48 
 
 		 430 aa  92.4  1e-17  Yersinia pestis Angola  Bacteria  normal  0.316005  normal  0.159215 
 
 
-
 
NC_009708  YpsIP31758_1688  oligogalacturonide ABC transporter, periplasmic oligogalacturonide-binding protein  23.48 
 
 		 430 aa  92  2e-17  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0550228  n/a   
 
 
-
 
NC_010465  YPK_1798  extracellular solute-binding protein  23.48 
 
 		 430 aa  92  2e-17  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.763472  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  22.91 
 
 		 427 aa  88.2  2e-16  Clostridium perfringens SM101  Bacteria  normal  1  n/a   
 
 
-
 
NC_012034  Athe_2376  extracellular solute-binding protein family 1  20.81 
 
 		 438 aa  87  6e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  1  n/a   
 
 
-
 
NC_013421  Pecwa_2395  extracellular solute-binding protein family 1  24.27 
 
 		 451 aa  85.9  0.000000000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  1  n/a   
 
 
-
 
NC_014210  Ndas_0558  extracellular solute-binding protein family 1  23.99 
 
 		 444 aa  85.1  0.000000000000002  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  1  normal  1 
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  30.8 
 
 		 419 aa  84.7  0.000000000000003  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  26.4 
 
 		 435 aa  84.7  0.000000000000003  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  27.27 
 
 		 429 aa  84.7  0.000000000000003  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_012917  PC1_2102  extracellular solute-binding protein family 1  23.37 
 
 		 439 aa  83.2  0.000000000000008  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  28.49 
 
 		 460 aa  81.3  0.00000000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_012917  PC1_3369  extracellular solute-binding protein family 1  29.86 
 
 		 430 aa  80.5  0.00000000000006  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  1  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  22.91 
 
 		 414 aa  80.1  0.00000000000008  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal  1 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  31.08 
 
 		 421 aa  79.3  0.0000000000001  Dictyoglomus turgidum DSM 6724  Bacteria  normal  1  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  32.45 
 
 		 422 aa  78.6  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013521  Sked_06560  ABC-type sugar transport system, periplasmic component  30.12 
 
 		 453 aa  79  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  1 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  25.5 
 
 		 420 aa  77.8  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal  1 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  30.94 
 
 		 429 aa  77  0.0000000000007  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  31.25 
 
 		 420 aa  76.3  0.000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  30.39 
 
 		 406 aa  75.5  0.000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal  1 
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  28.5 
 
 		 504 aa  73.6  0.000000000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013235  Namu_1773  extracellular solute-binding protein family 1  23.68 
 
 		 465 aa  72  0.00000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  0.504545  normal  0.290135 
 
 
-
 
NC_010001  Cphy_0619  extracellular solute-binding protein  21.41 
 
 		 463 aa  72  0.00000000002  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.0000037115  n/a   
 
 
-
 
NC_013530  Xcel_1371  extracellular solute-binding protein family 1  27.37 
 
 		 438 aa  72.4  0.00000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  1  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  26.92 
 
 		 423 aa  71.2  0.00000000003  Gardnerella vaginalis 409-05  Bacteria  n/a    normal  1 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  28.7 
 
 		 433 aa  70.9  0.00000000004  Salinispora arenicola CNS-205  Bacteria  normal  1  hitchhiker  0.00190936 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  29.94 
 
 		 435 aa  70.1  0.00000000007  Thermobispora bispora DSM 43833  Bacteria  normal  1  normal  0.23125 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  30.82 
 
 		 399 aa  70.1  0.00000000007  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_009664  Krad_2144  extracellular solute-binding protein family 1  24.23 
 
 		 432 aa  70.1  0.00000000008  Kineococcus radiotolerans SRS30216  Bacteria  normal  1  normal  1 
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  27.52 
 
 		 433 aa  68.9  0.0000000001  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal  1 
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  28.87 
 
 		 431 aa  69.3  0.0000000001  Sanguibacter keddieii DSM 10542  Bacteria  normal  1  normal  0.340884 
 
 
-
 
NC_011886  Achl_3566  extracellular solute-binding protein family 1  29.47 
 
 		 426 aa  68.6  0.0000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  1 
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  30.73 
 
 		 431 aa  67.8  0.0000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  1  normal  0.202326 
 
 
-
 
NC_009832  Spro_2571  extracellular solute-binding protein  25.15 
 
 		 417 aa  68.2  0.0000000003  Serratia proteamaculans 568  Bacteria  normal  1  normal  1 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  28.48 
 
 		 416 aa  67.8  0.0000000004  Bacillus cereus E33L  Bacteria  normal  1  n/a   
 
 
-
 
NC_011886  Achl_1750  extracellular solute-binding protein family 1  31.25 
 
 		 448 aa  67.8  0.0000000004  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000348272 
 
 
-
 
NC_008541  Arth_3387  extracellular solute-binding protein  30.47 
 
 		 447 aa  67.4  0.0000000005  Arthrobacter sp. FB24  Bacteria  normal  0.278202  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  28.95 
 
 		 421 aa  67.4  0.0000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  1  normal  0.411366 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  26.29 
 
 		 454 aa  66.6  0.0000000007  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  27.88 
 
 		 416 aa  66.2  0.000000001  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  28.49 
 
 		 413 aa  65.9  0.000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_012912  Dd1591_0825  extracellular solute-binding protein family 1  27.08 
 
 		 429 aa  65.5  0.000000002  Dickeya zeae Ech1591  Bacteria  normal  1  n/a   
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  31.69 
 
 		 430 aa  63.9  0.000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  1  normal  0.553068 
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  26.67 
 
 		 453 aa  63.5  0.000000007  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal  1 
 
 
-
 
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