| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | PC1_2102 |
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| Symbol | |
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| ID | 8133046 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pectobacterium carotovorum subsp. carotovorum PC1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_012917 |
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| Strand | - |
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| Start bp | 2404696 |
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| End bp | 2406015 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 644865391 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003017678 |
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| Protein GI | 253688488 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGAAAA CACGGAACAC ATTATCTCAC CTACTCCTGC TCTGTGCTGC GCTTCCTTTC
GGCGCGACAT TTTCTCATTC TGCTGATGCT GCCGAGATCC GCATCTCCTG GTGGGGCGGC
AACCAACGGC ACGAAGCGAC ACTCGCGGCG ATTAACGCGT TTCAGAAAGC CAATCCGACC
ATTACCGTCA AAGCCGAATA CGCCGGTTGG GACGGCTATC TTTCCCGCCT GTCAACCCAG
ATGGCTGGCG GGCAGGAACC GGATGTTATT CGTATTGACT GGAACTGGCT GCCGCAGTTT
TCCCGTAACG GCGACGGTTT TTATGATTTG AATAAGCAAA AAGAGATTCT GACGCTGGGA
GATTTCCCGC CTAACTACCT GCAAACCTCG GATGTCAAAG GGAAGCTGCA AGGTCTTCCG
ATTTCGATGA CGTCTCGCAG CATGATTTAC AACAAAGCCA CCTGGGACAA AGCGGGTGTT
GCCTACCCGA AAACCTGGGA TGAGCTGTTT GCCGCGGGTC CGGTATTTAA ACAAAAACTG
GGCGACAATT ATTACCCGCT TGGCGTTGCC CAGGGGGCAA GTGATGTGTT GGATATCCTC
ACTCTCGGCC GTAGCTACAT GGCTCAGAAA TACGGTATCG ACCTCATTGA TGAGAAGAAG
CAGAGCATCG CCTACAGCCG CGATCAGATG CGTGAACTCT TCGGTTTTTA TAAAAAGTTG
GTTGATTCCC ATGTGATCCC CGACCAGCGC TATTTCTCGT CGTTCGGGCG CACTAATGTC
TATGAGATTC GTCCGTGGAT TAACGGTGAG TTAGCCGGTA TGTACCTATG GGATTCGGCC
ATCTACACCT ATTCCAGCAA TATGCCGAAA GAGGTGGTGC TGGAAACCGG GCCGTTTATC
ACCATGCCAA ACGCCAAAGA TTCAGGGCTG ACGAGCAAAC CGTCTTCGCT GTTTGCGATC
AGCAAGAACA GTAAGCACCC TAAAGAAGCA GCGATGCTGA TGAGTTTCAT GCTCAGTAAT
CCTGAAGGCG TGAAAGCGCT TGGGCTGCAA AACGGGATGC CCGCTAATCC GAAGGCACAA
AAATTGCTGG AAGATATTGG CGTGATCAAC CCCGGTAACC TGTTAGCAAA TGCCTATCGC
GCCGCGGCGG AGCAACCTGC CTCTAAGGTG CCCGTTTCAC CGTTTATGGA AAATCAGGAG
CTGGTTCAAC TGTGGACGAC CAGTCTGCAA AAACTGGATT ACGGTAATGG AGAGGTGAAT
AAGGTGGCCG ATGACTTCCT CAACGGCGCT AACCGCATAT TAAAACGTGC GATTCGATAG
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| Protein sequence | MAKTRNTLSH LLLLCAALPF GATFSHSADA AEIRISWWGG NQRHEATLAA INAFQKANPT
ITVKAEYAGW DGYLSRLSTQ MAGGQEPDVI RIDWNWLPQF SRNGDGFYDL NKQKEILTLG
DFPPNYLQTS DVKGKLQGLP ISMTSRSMIY NKATWDKAGV AYPKTWDELF AAGPVFKQKL
GDNYYPLGVA QGASDVLDIL TLGRSYMAQK YGIDLIDEKK QSIAYSRDQM RELFGFYKKL
VDSHVIPDQR YFSSFGRTNV YEIRPWINGE LAGMYLWDSA IYTYSSNMPK EVVLETGPFI
TMPNAKDSGL TSKPSSLFAI SKNSKHPKEA AMLMSFMLSN PEGVKALGLQ NGMPANPKAQ
KLLEDIGVIN PGNLLANAYR AAAEQPASKV PVSPFMENQE LVQLWTTSLQ KLDYGNGEVN
KVADDFLNGA NRILKRAIR
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