Gene Dd1591_1966 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDd1591_1966 
Symbol 
ID8119283 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDickeya zeae Ech1591 
KingdomBacteria 
Replicon accessionNC_012912 
Strand
Start bp2247754 
End bp2249046 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content51% 
IMG OID644852356 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003004294 
Protein GI251789573 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.810983 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAAG TGATCCTACG CACATTGATT GCCTCTTCTC TTGCACTGAT GGCGCATCAG 
TCCTTTGCGG CTGAGCAGGT TGACTTACGT ATGTCATGGT GGGGTGGCAA CGGTCGCCAC
CAGGTGACAC TGAAAGCCAT TGAGGAATTC CAGAAAAAAT ATCCGGATAT CAAGGTTAAA
GCAGAATACA CCGGTTGGGA TGGACATCTG TCTCGTTTGA CCACGCAGAT CGCGGGTAAT
ACCGAGCCTG ATGTAATGCA GACCAACTGG AACTGGCTGC CTATATTCTC CCGTACCGGT
GATGGCTTCT ACGACCTGAA CAAAGTGAAA GACGTGCTGG ACCTGTCGCA GTTTGATGCG
AAAGAACTGC AGGCGACGAC GGTTGACGGC AAACTGAACG GGATTCCGAT TTCCGTGACG
GCGCGCGTCT TCTATTACAA CACCGAAACC TGGAAGAAAT CCGGCCTGAC CGCCCCGAAA
AACTGGGATG AACTGGTGAA TGCCGGCAAA GTCTTCAAAG AAAAACTGGG CGACCAATTC
TATCCGCTGG TGCTGGAGCA TCAGGACTCG TTGGCGTTGC TGAATTCTTA CATGGTACAG
AAGTACAACA TTCCGGCGGT GGACGAGAAA AACAAGAAAT TCTCTTATAC CGACGCGCAA
TGGGTAGAGT TCTTCGAGAT GTACAAGAAG CTGGTTGATG GCCACGTCAT GCCGTCTGCG
AAATACTACG CTTCGTTCGG CAAGAGCAAC ATGTATGAAA TGAAGCCGTG GATTGCCGGT
GACTGGGGTG GCACGTACAT GTGGAACTCC ACCATCACCA AGTACTCCGA TAACCTGCAG
CCGCCGGCCA AACTGGAACT GGGTGCCTAC CCCATGCTGC CGGGTGCCAA AGAAGCGGGA
TTATTCTTTA AACCAGCTCA GATGTTGTCT ATCGGCAAGT CCAGCAAGCA CCCGAAAGAA
GCCGCTATGT TGATCAACTA CCTGTTGAAC AGTAAAGAAG GCATTCAGGC GCTGGGACTG
GAACGCGGCG TGCCGTTAAG CAAAGCAGCC GTTGCTCAGT TGCGTGCCGA TGGCGTCATC
AAAGACAACG ACCCATCGGT AGCGGGCCTG AACCAGGCAT TGTCCTTACC GCATGAAACC
AAGACATCGC CTTATTTCGA CGATCCGCAA ATCGTCGCCC TGTTTGGTGA TGCCATTCAA
TATATCGATT ATGGTCAGAA ATCAGTGGAA GAAACCGCCA AATACTTCCA ACGTCAGGCT
GATCGTATTC TGAAACGCGC CATGAAAGAA TAA
 
Protein sequence
MKKVILRTLI ASSLALMAHQ SFAAEQVDLR MSWWGGNGRH QVTLKAIEEF QKKYPDIKVK 
AEYTGWDGHL SRLTTQIAGN TEPDVMQTNW NWLPIFSRTG DGFYDLNKVK DVLDLSQFDA
KELQATTVDG KLNGIPISVT ARVFYYNTET WKKSGLTAPK NWDELVNAGK VFKEKLGDQF
YPLVLEHQDS LALLNSYMVQ KYNIPAVDEK NKKFSYTDAQ WVEFFEMYKK LVDGHVMPSA
KYYASFGKSN MYEMKPWIAG DWGGTYMWNS TITKYSDNLQ PPAKLELGAY PMLPGAKEAG
LFFKPAQMLS IGKSSKHPKE AAMLINYLLN SKEGIQALGL ERGVPLSKAA VAQLRADGVI
KDNDPSVAGL NQALSLPHET KTSPYFDDPQ IVALFGDAIQ YIDYGQKSVE ETAKYFQRQA
DRILKRAMKE