Gene Bfae_05090 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBfae_05090 
Symbol 
ID8399057 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBrachybacterium faecium DSM 4810 
KingdomBacteria 
Replicon accessionNC_013172 
Strand
Start bp583710 
End bp585002 
Gene Length1293 bp 
Protein Length430 aa 
Translation table11 
GC content67% 
IMG OID644996596 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_003153968 
Protein GI257067713 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAACGAC GGACTGTATT GGCAGGAATG GCACTGGGCG GCCTCGCCAT GGCGGGCTGC 
AGCGACGGCG GCGCCGGCGG AGGAGCCGGC ACGGAGGTCG ACGTCTCCGA CACGGAGATG
GAGGCCACCA TCGAGTTCGC CGCCTGGGAG TCGGACTTCG CCTGGGACGC CGTGATCGAG
GGCTTCAACG AGAAGTACCC GAACATCACC GTGCAGGTCA CCAAGAGCCC GTTCAAGGAC
TTCTTCACCC GGCTGCAGAC CCAGGCCTCC GGGAACAACC TCCCGGACGC GTTCATGATG
AACGGCCCCA ACTTCCAGCT CTACGCGAGC CACGACATCC TCGTCCCCTT CGACACGGCC
GTGGACGCCG GGGAGCTCGA CTTCTCGAAC TACCCCGAGG CGATGGAGGA GCTCTACACC
TACGAGGGCG TGCCCTACGG CGTCCCCACC TCCTACGACT CGATCGGCCT GTGGTACAAC
GAGGAGCTCT TCGAGAAGGC CGGCGTGGAG GTGCCCACCG ACGAATGGAC GTGGGAGGAC
CTGCACGAGG CGTCCAAGGC CATCAGCGAT GCGCTGAAGG ACGAGGGCGT CTACGGGTTC
GCCGGCGGCG CCTACAACCA GGAGCTCTTC TACAACCTGA TCTTCCAGGC CGAGGGCGCC
GTGCTCAACG AGGACGCCAC CGAGGCCGAG TACTCCAGCC CCGGCAGCCG TGAGGCGCTG
CAGTTCCTGC GCGACATGGT CGAGGACGGC TCCTCGCCCT CGATCCAGAC CACCGCCGAC
ACCTCGCCCG ACGAGCTGTT CAAGAGCGGC AAGGCGGCGA TGGTCTACGG CGGCAGCTTC
CGCGTCTCCG GGTACGTGGA CTCCGCCGTG GGAGACGTCA TCCAGGTGGT GCGCCTCCCC
GAGGGGAAGC AGCGCGGCGT GGTGCTGCAC GGCGGCGCCG TGGTCGTGAA CGCGGAGAGC
GAGAACGCCG ATGCCGCCGC CGCGTTCGCG GTCTTCCACG GCAGCGAGGA GGGCCAGCGG
ATCATCGGCG AATCCGGTGC CTCGATCCCG GCGTTCCAGG GCACCGAGCA GGCGTACATC
GATGCGCACC CGGAGTACGA CCTGAGCATC TTCCCCGAAT CCGCCGAGGA GTACGGCTTC
CCCTACCCCG TCTCCGCGAA CACGCAGGCG TGGCTCGAGG TCGAGAGCGA CATGGTCCCC
AAGATCCTCG CCGGTGACCT GAGCGTCGAG GAGGGGACCA CGCAGCTCGA CGAGAAGATC
AACGCACTCC TCACGGAGGA GGCCGAGCTG TGA
 
Protein sequence
MKRRTVLAGM ALGGLAMAGC SDGGAGGGAG TEVDVSDTEM EATIEFAAWE SDFAWDAVIE 
GFNEKYPNIT VQVTKSPFKD FFTRLQTQAS GNNLPDAFMM NGPNFQLYAS HDILVPFDTA
VDAGELDFSN YPEAMEELYT YEGVPYGVPT SYDSIGLWYN EELFEKAGVE VPTDEWTWED
LHEASKAISD ALKDEGVYGF AGGAYNQELF YNLIFQAEGA VLNEDATEAE YSSPGSREAL
QFLRDMVEDG SSPSIQTTAD TSPDELFKSG KAAMVYGGSF RVSGYVDSAV GDVIQVVRLP
EGKQRGVVLH GGAVVVNAES ENADAAAAFA VFHGSEEGQR IIGESGASIP AFQGTEQAYI
DAHPEYDLSI FPESAEEYGF PYPVSANTQA WLEVESDMVP KILAGDLSVE EGTTQLDEKI
NALLTEEAEL