Gene Aaci_0795 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAaci_0795 
Symbol 
ID8424288 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAlicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 
KingdomBacteria 
Replicon accessionNC_013205 
Strand
Start bp866867 
End bp868249 
Gene Length1383 bp 
Protein Length460 aa 
Translation table11 
GC content48% 
IMG OID645026911 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003184227 
Protein GI258510793 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.215252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATCGTA ATGGAAAGAA GGTTGTTTTT ACTATTCCGG TTGTTCTGAC GATGCTCCTA 
GTTGGATGTG GTACATCAAC TGCGAATAAG CCTGGTCATC AGTTCTCAAC GAGTGAAGGC
AGTGCTTCTA CCCAAGTTGT CACGTTACAT TACATGCTCT GGGATCCGAA CGAGGAAATC
GGTTACAAGC AGTCCATCGC CGTCTTTGAA AAGTTACATC CGAATATCAA AGTTGTCATC
GAACAGTACC CGTGGTCTCA GTATTGGCAA AAATTAGAGA CTGAAATGGC GGCAGGGACA
GCTCCCGACG TGTTTTGGGA TCATGTTACT TATTTCCCTA CTTTTGTTAC GAACGGTCAA
CTTCTCAATT TGACGCCTTA TATTAAGAGT TCCCATGTCG ATTTGAGAGA ATATTATCCG
AACTTGCTGA AGCAGTACGA GTACAACGGA AATATTTATG GCCTGCCAAA GGACTGGGAC
ACGATAGCCA TATTTTATAA CAAGAAGCTG TTCGAAAAGG ATCATGTTCC ATTTCCAACA
AACTTGACTT GGAATCCTAG AAATGGTGGA ACATTGGTCA AGGTTGCTGA AGAAATGACC
GTAGATAAGA ACGGAAAACA CCCGGGCCAG CCAGGGTTCA ATCCGAACCA AATCGTACAA
TACGGATTTA TGTCATATAA CTCAAATCAG TCATTTTATT ACAACTTTTT GGCCGAAGAC
GGAGTGAAAA TCCTAGACCA TAACTTCGGG ACTCAGGTGC TAATGGACAC CCCGCAGGCC
ATTCAGACCA TGCAGAATCT TATTGACATG ATTTACAAGT ACCATGTATC GCCTTCTGGA
GCCGAGGGAG CTAACGTTGT AAATAGTGAA GGAAATGCTC AGCAATTATT TGAAGAAGGT
AAGCTGGCGA TGTACACCGA TGGCGATTGG GTCCTGACAC CTGTCGTGAA GGCAAGCAAT
TTCCCTGTCG GGATAGCTCC GCTACCTGTC GGGCCAATAG GTCGTGTGTC TGTCATGAAC
GGACTGTCGG ACGCCATCTA TGCGCATACG AAGTACCCAA AGCAAGCGTG GGAACTGGTT
CAGTGGCTGG CGAGTCCGCA ATCTGAGCGG ATCCTCGCAT CGGGTGGTTA CGTATGGCCT
GGGATCAAGT CGTTGGCACC ACTGTTTGCA CAGGCCTGGA CCAAGAAAGG CGTCGATGTC
ACGCCGTTCC TCGAAGAATC GAGGGGTAAG ACCATATCGT TCCCCATCAC TGTGAACTGG
GGGCAAGCTG AGAACGCGAT CGACAAAGAA TTCGATTTAA TGTGGCTAGG GAAAGTGCCC
CCGTCTCAGG CGCTCCAAAC AGCCGTGCAG CAGGCGGATG CGGCACTGAA TGGCGGTCAG
TGA
 
Protein sequence
MNRNGKKVVF TIPVVLTMLL VGCGTSTANK PGHQFSTSEG SASTQVVTLH YMLWDPNEEI 
GYKQSIAVFE KLHPNIKVVI EQYPWSQYWQ KLETEMAAGT APDVFWDHVT YFPTFVTNGQ
LLNLTPYIKS SHVDLREYYP NLLKQYEYNG NIYGLPKDWD TIAIFYNKKL FEKDHVPFPT
NLTWNPRNGG TLVKVAEEMT VDKNGKHPGQ PGFNPNQIVQ YGFMSYNSNQ SFYYNFLAED
GVKILDHNFG TQVLMDTPQA IQTMQNLIDM IYKYHVSPSG AEGANVVNSE GNAQQLFEEG
KLAMYTDGDW VLTPVVKASN FPVGIAPLPV GPIGRVSVMN GLSDAIYAHT KYPKQAWELV
QWLASPQSER ILASGGYVWP GIKSLAPLFA QAWTKKGVDV TPFLEESRGK TISFPITVNW
GQAENAIDKE FDLMWLGKVP PSQALQTAVQ QADAALNGGQ