| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_3329 |
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| Symbol | |
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| ID | 5324213 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009636 |
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| Strand | - |
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| Start bp | 3526276 |
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| End bp | 3527562 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640792280 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001328985 |
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| Protein GI | 150398518 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.955635 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.757839 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACGCATA AAATCAGCAG GCGAAGTGTA CTCGCGGGTG GGGCGGCACT TCTTTCGATG
TCGGCGATGG CAAGGAGCGC CCTTGCGCAG GAGGCGCGGC TGCGCGTGCT CTGGTGGGGC
TCTCAGGCCC GGGCCGACCG GACCAACAAG GTCAACCAGC TCTTCCAGGA GCAGAATGCG
GGTGTCGCCA TCAACGGCGA ATTTCTCGGC TGGAGCGATT ACTGGCCTCG GCTCGCGACG
CAGGTCGCCG GCCGTAACGC ACCCGACATC ATACAGATGG ACTATCGCTA CATCGTCGAA
TATGCCCGGC GCGGCGCGCT CGCGCCGCTC GACGACTATC TCGGCTCCGT GCTCAAGGTC
GAGGATTTCG ACCAGGTGCA GATCAAGGGC GGCAGCGTCG ACGGCAAGCT CTACGGCATC
AGCCTCGGCG CCAACTCGGC AGCGATGATG GTCAACGCCG CCGCTTTCGA GGAAGCCGGA
GTCGACCTGC CGAGCCCATC CACCACCTGG GAAGAGATGG CAAAGATCGG CGCTGAGATC
ACCCAGGCGG GCAAGCGCAA GGGGTTCTAC GGCCTTTCCG ATGGCAGTGC CGTCGAGCCG
CTGCTCGAAA ACTGGCTTCG CCAGCGCGGC AAGGCGCTCT TCACCGCCGA AGGCAAGATC
GGTTACGATG CCAATGATGC GGCAGAATGG TTTACCATGT GGCAGAACAT GCGCGAGGCC
AAGGCGTGCG TTCCGCCGGA CGTGCAGGCG CTCGACCAGT ACACCGTGGA GACGAGCCCG
CTGTCGCTCG GCAAGTCGGC CGCCTCCTTT GCGCATTCCA ACCAGTTCGT CGCCTATCAG
GGCGTCAGCA AGGACAAGCT GGCGCTCCGC AGCCACCCGT TGATCAGCAA GGATTCGAAG
GGCGGCCATT ACCGCAAGCC GTCGATGTTC TTCTCGGTCG CGGCTCAGAC GAAGGACCCG
GAACTCGGCG CCAAATATGT CAACTTCTTC GTCAAGGATC CGAAGGCCGC AGAAATCCTC
GGCGTCGAGC GCGGCGTACC GGAATCGTCC GCCGTGCGCG AGGCTCTCGC GCCGACGCTC
GACGAGCTCG GCCGCGCCAT GCTCGACTAT GTCTCCGGCC TCGGTCCCCT TGCCGGCGAA
CTGCCGCCAC CCCCGCCGAG CGGTGCCGGC GAGGCGGAAT TCGCACTGCG CAACGTCGCC
GAACAGGTGG GCTTCGGTCA GCTCGATGCC AAGCAGGGCG GCGAGACGCT GGTGAACGAA
GTCAGCCAAA TTCTCGCGCG GGGTTAG
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| Protein sequence | MTHKISRRSV LAGGAALLSM SAMARSALAQ EARLRVLWWG SQARADRTNK VNQLFQEQNA
GVAINGEFLG WSDYWPRLAT QVAGRNAPDI IQMDYRYIVE YARRGALAPL DDYLGSVLKV
EDFDQVQIKG GSVDGKLYGI SLGANSAAMM VNAAAFEEAG VDLPSPSTTW EEMAKIGAEI
TQAGKRKGFY GLSDGSAVEP LLENWLRQRG KALFTAEGKI GYDANDAAEW FTMWQNMREA
KACVPPDVQA LDQYTVETSP LSLGKSAASF AHSNQFVAYQ GVSKDKLALR SHPLISKDSK
GGHYRKPSMF FSVAAQTKDP ELGAKYVNFF VKDPKAAEIL GVERGVPESS AVREALAPTL
DELGRAMLDY VSGLGPLAGE LPPPPPSGAG EAEFALRNVA EQVGFGQLDA KQGGETLVNE
VSQILARG
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