Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dd1591_0825 |
Symbol | |
ID | 8120641 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Dickeya zeae Ech1591 |
Kingdom | Bacteria |
Replicon accession | NC_012912 |
Strand | + |
Start bp | 956572 |
End bp | 957861 |
Gene Length | 1290 bp |
Protein Length | 429 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 644851211 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_003003183 |
Protein GI | 251788462 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGAT TATTAACAGG ATTGATATTG TTGGCATTGA CCTTACTGGG ACAGGCTCAG GCGGCGGAAA CGGCGACATT GCGCCTATCC TGGTGGGGCG GCAACAGCCG CCATCAGGCT ACGCTGGCCG CCATTGAGGC GTTTCAGAAA AAATACCCGG GAATTACGGT CAAAGCGGAG TATACCGGTT GGGATGGGTA TCTTTCGCGC CTGACGACGC AAATCGCCAG CGGTGAAGAA CCGGATGTTG TGCAAATTAA CTGGAACTGG ATCCCGATTT TTTCCCGCAA CGGCACCGGT TTCTACGATT TAAATAAACT CAACGATACG CTGAAATTAC AGGATTTTCC GGCCGATGCG CTCACGACGG TTGACGGTAA AGTCAATGCT CTCTCTGCGT CGCTGAACGG GTTGGTGATG TATTACAACG TCGATACCTG GAAAAAAGCC GGGCTGGCGT ACCCGACCAC TTGGGAAGAG CTGTTCCAGG CCGGTAAGGT GTTCAGGGAT AAACTCGGCG ACAACTATTT TCCGCTGGCA TCTCCGGCGC AGGATAGTGG CGAGGGGTTG CTGGAGCTGA TTAACACCTA CATGACCCAG AAATTCAACG TGGGCATGAT TGACGAGCAG AATAAACGTT TCAACTACAC GGAAGCACAG TGGCTGGAGG CATTTCGCTT CTACAAACGA CTGGTGGATG ACCATGTCAT CCCGTCGGCG AAATACTACA ACGCATTTGG CAAAGCCGGC GTGTTCGAAA CCCGGCCGTG GATCAACGGC GAGTATGGCG GGGCGCAACT GTGGGCTTCC GTCGTGAAGA AATACGCTGA ACCGCTGGCT CCGCCGGCCA GGCTGGAACT GGGTCCGTAT ATCATGACGC CGGGTTCCGA TAATCCGGGG CAATTTTTCA AACCGTCGAT GCTGTTTGCC ATCAGCAAAA ATAGCAGACA CCCGAAAGAA GCGGCCCTGC TGCTTAACTT CCTGATGAAT GAACCGCAAG GCAGCCTCTT GATGGGCACC GAGCGTGGCG TACCGCTCAG CCGGGTTGCG CGGCAGACGT TGCAGGACAA TCAAAAGCTG GATACGCAGG ATCTGGCGGT GAAGGGGTTG ATGCAGGCGC TGGAAAAACC GATGCAAACC CCGGTGTCTT CCTATATCGA AGACCCACAA CTGGCCAGCC TGATTTTGCA GACGGTCGAA CAACTGGATT ACGGCAACAA GACGGTGGAG GTCTCGGCGA AGACTTTTAG TGATGCCGGT AATCGAATCC TAAAACGGGT CATCCGCTAA
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Protein sequence | MMRLLTGLIL LALTLLGQAQ AAETATLRLS WWGGNSRHQA TLAAIEAFQK KYPGITVKAE YTGWDGYLSR LTTQIASGEE PDVVQINWNW IPIFSRNGTG FYDLNKLNDT LKLQDFPADA LTTVDGKVNA LSASLNGLVM YYNVDTWKKA GLAYPTTWEE LFQAGKVFRD KLGDNYFPLA SPAQDSGEGL LELINTYMTQ KFNVGMIDEQ NKRFNYTEAQ WLEAFRFYKR LVDDHVIPSA KYYNAFGKAG VFETRPWING EYGGAQLWAS VVKKYAEPLA PPARLELGPY IMTPGSDNPG QFFKPSMLFA ISKNSRHPKE AALLLNFLMN EPQGSLLMGT ERGVPLSRVA RQTLQDNQKL DTQDLAVKGL MQALEKPMQT PVSSYIEDPQ LASLILQTVE QLDYGNKTVE VSAKTFSDAG NRILKRVIR
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