172 homologs were found in PanDaTox collection
for query gene Bcav_1534 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_1534  extracellular solute-binding protein family 1  100 
 
 
436 aa  856    Beutenbergia cavernae DSM 12333  Bacteria  normal  0.191711  decreased coverage  0.00957964 
 
 
-
 
NC_012669  Bcav_0919  extracellular solute-binding protein family 1  32.85 
 
 
441 aa  209  1e-52  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3899  extracellular solute-binding protein family 1  34.32 
 
 
435 aa  199  7.999999999999999e-50  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_0806  extracellular solute-binding protein family 1  33.25 
 
 
437 aa  192  7e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0510551 
 
 
-
 
NC_011886  Achl_3128  extracellular solute-binding protein family 1  31.94 
 
 
450 aa  185  2.0000000000000003e-45  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0477771 
 
 
-
 
NC_008541  Arth_3326  extracellular solute-binding protein  31.67 
 
 
453 aa  184  4.0000000000000006e-45  Arthrobacter sp. FB24  Bacteria  decreased coverage  0.00000398294  n/a   
 
 
-
 
NC_012669  Bcav_0793  extracellular solute-binding protein family 1  31.71 
 
 
442 aa  181  2e-44  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.0145438 
 
 
-
 
NC_014210  Ndas_2036  extracellular solute-binding protein family 1  30.11 
 
 
439 aa  175  9.999999999999999e-43  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.182591  normal  0.899466 
 
 
-
 
NC_013172  Bfae_29730  ABC-type sugar transport system, periplasmic component  31.04 
 
 
434 aa  174  2.9999999999999996e-42  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_1049  extracellular solute-binding protein family 1  30.33 
 
 
437 aa  170  4e-41  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal  0.340866 
 
 
-
 
NC_007333  Tfu_1702  sugar-binding protein  30.73 
 
 
442 aa  170  5e-41  Thermobifida fusca YX  Bacteria  normal  0.981171  n/a   
 
 
-
 
NC_011886  Achl_3119  extracellular solute-binding protein family 1  32.38 
 
 
428 aa  168  2e-40  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_013530  Xcel_2537  extracellular solute-binding protein family 1  29.16 
 
 
450 aa  160  5e-38  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.272028  n/a   
 
 
-
 
NC_011886  Achl_1199  extracellular solute-binding protein family 1  27.93 
 
 
432 aa  159  9e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000829014 
 
 
-
 
NC_011886  Achl_3124  extracellular solute-binding protein family 1  28.9 
 
 
429 aa  159  9e-38  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.0621948 
 
 
-
 
NC_008541  Arth_3329  extracellular solute-binding protein  28.13 
 
 
431 aa  159  1e-37  Arthrobacter sp. FB24  Bacteria  normal  0.0332045  n/a   
 
 
-
 
NC_011886  Achl_0895  extracellular solute-binding protein family 1  28.13 
 
 
436 aa  158  2e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal  0.441999 
 
 
-
 
NC_013521  Sked_05420  ABC-type sugar transport system, periplasmic component  28.96 
 
 
438 aa  157  5.0000000000000005e-37  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.0143899  normal 
 
 
-
 
NC_008541  Arth_1126  extracellular solute-binding protein  28.28 
 
 
432 aa  157  5.0000000000000005e-37  Arthrobacter sp. FB24  Bacteria  normal  0.190587  n/a   
 
 
-
 
NC_011886  Achl_0499  extracellular solute-binding protein family 1  29.55 
 
 
434 aa  157  5.0000000000000005e-37  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.000057577 
 
 
-
 
NC_008541  Arth_3324  extracellular solute-binding protein  28.61 
 
 
427 aa  156  6e-37  Arthrobacter sp. FB24  Bacteria  hitchhiker  0.000420771  n/a   
 
 
-
 
NC_011988  Avi_5580  ABC transporter/Periplasmic pectin oligomer binding protein  28.13 
 
 
427 aa  154  2e-36  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008541  Arth_0780  extracellular solute-binding protein  27.53 
 
 
436 aa  151  2e-35  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_011886  Achl_3131  extracellular solute-binding protein family 1  28.26 
 
 
422 aa  151  2e-35  Arthrobacter chlorophenolicus A6  Bacteria  n/a    decreased coverage  0.00803878 
 
 
-
 
NC_013521  Sked_05230  ABC-type sugar transport system, periplasmic component  30 
 
 
450 aa  151  2e-35  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.808581  normal 
 
 
-
 
NC_009636  Smed_3329  extracellular solute-binding protein  27.68 
 
 
428 aa  150  5e-35  Sinorhizobium medicae WSM419  Bacteria  normal  0.955635  normal  0.757839 
 
 
-
 
NC_011369  Rleg2_4015  extracellular solute-binding protein family 1  28.91 
 
 
428 aa  146  6e-34  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.946152  normal 
 
 
-
 
NC_012850  Rleg_4344  extracellular solute-binding protein family 1  28.34 
 
 
428 aa  141  1.9999999999999998e-32  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.0302279  hitchhiker  0.00000351134 
 
 
-
 
NC_012850  Rleg_4335  extracellular solute-binding protein family 1  27.22 
 
 
428 aa  134  1.9999999999999998e-30  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  hitchhiker  0.000444207 
 
 
-
 
NC_009620  Smed_3578  extracellular solute-binding protein  28.02 
 
 
428 aa  134  3.9999999999999996e-30  Sinorhizobium medicae WSM419  Bacteria  normal  0.608798  normal 
 
 
-
 
NC_009664  Krad_0589  extracellular solute-binding protein family 1  28.94 
 
 
452 aa  132  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.289831  normal  0.0417818 
 
 
-
 
NC_011369  Rleg2_4006  extracellular solute-binding protein family 1  26.65 
 
 
428 aa  129  9.000000000000001e-29  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_013530  Xcel_0897  extracellular solute-binding protein family 1  27.93 
 
 
446 aa  129  1.0000000000000001e-28  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0316444  n/a   
 
 
-
 
NC_012669  Bcav_3557  extracellular solute-binding protein family 1  26.58 
 
 
458 aa  129  1.0000000000000001e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_29740  ABC-type sugar transport system, periplasmic component  29.92 
 
 
437 aa  123  7e-27  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_2228  extracellular solute-binding protein family 1  27.06 
 
 
460 aa  122  9.999999999999999e-27  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.754729 
 
 
-
 
NC_013205  Aaci_2460  extracellular solute-binding protein family 1  24.11 
 
 
441 aa  116  8.999999999999998e-25  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.372805  n/a   
 
 
-
 
NC_012034  Athe_2081  extracellular solute-binding protein family 1  24.39 
 
 
434 aa  113  5e-24  Anaerocellum thermophilum DSM 6725  Bacteria  normal  0.159947  n/a   
 
 
-
 
NC_013530  Xcel_2647  extracellular solute-binding protein family 1  29.05 
 
 
446 aa  112  2.0000000000000002e-23  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.890591  n/a   
 
 
-
 
NC_011661  Dtur_0437  extracellular solute-binding protein family 1  23.06 
 
 
424 aa  108  2e-22  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.00000010114  n/a   
 
 
-
 
NC_013093  Amir_0970  extracellular solute-binding protein family 1  24.62 
 
 
428 aa  108  2e-22  Actinosynnema mirum DSM 43827  Bacteria  normal  0.153801  n/a   
 
 
-
 
NC_013521  Sked_03450  ABC-type sugar transport system, periplasmic component  25.53 
 
 
416 aa  107  3e-22  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.355174 
 
 
-
 
NC_013517  Sterm_4040  extracellular solute-binding protein family 1  23.74 
 
 
434 aa  99  1e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_3784  extracellular solute-binding protein family 1  22.99 
 
 
430 aa  98.2  3e-19  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_0697  extracellular solute-binding protein family 1  21.73 
 
 
433 aa  93.6  7e-18  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4051  extracellular solute-binding protein family 1  21.55 
 
 
434 aa  92.4  1e-17  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_009654  Mmwyl1_0777  extracellular solute-binding protein  24.25 
 
 
428 aa  92  2e-17  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010001  Cphy_3402  extracellular solute-binding protein  23.83 
 
 
451 aa  90.5  5e-17  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000236647  n/a   
 
 
-
 
NC_009664  Krad_2144  extracellular solute-binding protein family 1  24.62 
 
 
432 aa  90.1  8e-17  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_009708  YpsIP31758_1688  oligogalacturonide ABC transporter, periplasmic oligogalacturonide-binding protein  24.62 
 
 
430 aa  88.2  3e-16  Yersinia pseudotuberculosis IP 31758  Bacteria  normal  0.0550228  n/a   
 
 
-
 
NC_010159  YpAngola_A2648  oligogalacturonide ABC transporter periplasmic oligogalacturonide-binding protein  24.62 
 
 
430 aa  88.2  3e-16  Yersinia pestis Angola  Bacteria  normal  0.316005  normal  0.159215 
 
 
-
 
NC_010465  YPK_1798  extracellular solute-binding protein  24.62 
 
 
430 aa  88.2  3e-16  Yersinia pseudotuberculosis YPIII  Bacteria  normal  0.763472  n/a   
 
 
-
 
NC_013421  Pecwa_2197  extracellular solute-binding protein family 1  24.94 
 
 
429 aa  87.8  3e-16  Pectobacterium wasabiae WPP163  Bacteria  normal  0.700843  n/a   
 
 
-
 
NC_012034  Athe_2376  extracellular solute-binding protein family 1  23.12 
 
 
438 aa  87.4  5e-16  Anaerocellum thermophilum DSM 6725  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_1966  extracellular solute-binding protein family 1  25 
 
 
430 aa  85.1  0.000000000000002  Dickeya zeae Ech1591  Bacteria  normal  0.810983  n/a   
 
 
-
 
NC_012917  PC1_1904  extracellular solute-binding protein family 1  23.61 
 
 
429 aa  84.3  0.000000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  0.172949  n/a   
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  26.56 
 
 
435 aa  84  0.000000000000005  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_2037  extracellular solute-binding protein family 1  23.9 
 
 
430 aa  83.2  0.000000000000008  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_0558  extracellular solute-binding protein family 1  22.94 
 
 
444 aa  79.3  0.0000000000001  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  30.88 
 
 
429 aa  79  0.0000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009436  Ent638_3292  extracellular solute-binding protein  22.85 
 
 
428 aa  77.8  0.0000000000004  Enterobacter sp. 638  Bacteria  normal  normal  0.309737 
 
 
-
 
NC_013517  Sterm_4050  extracellular solute-binding protein family 1  22.97 
 
 
433 aa  75.5  0.000000000002  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_2102  extracellular solute-binding protein family 1  24.59 
 
 
439 aa  74.3  0.000000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05090  ABC-type sugar transport system, periplasmic component  27.31 
 
 
430 aa  72.8  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_27690  ABC-type sugar transport system, periplasmic component  30.7 
 
 
431 aa  71.6  0.00000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.340884 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  24.76 
 
 
447 aa  69.7  0.0000000001  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_013421  Pecwa_2395  extracellular solute-binding protein family 1  23.96 
 
 
451 aa  69.7  0.0000000001  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  26.76 
 
 
426 aa  68.6  0.0000000002  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_012912  Dd1591_0825  extracellular solute-binding protein family 1  24.34 
 
 
429 aa  68.9  0.0000000002  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  34.43 
 
 
427 aa  67.8  0.0000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  21.21 
 
 
439 aa  67.4  0.0000000005  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  25.43 
 
 
419 aa  67  0.0000000007  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  25.64 
 
 
427 aa  65.9  0.000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2114  extracellular solute-binding protein family 1  33.86 
 
 
428 aa  65.5  0.000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  25.68 
 
 
421 aa  65.5  0.000000002  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_012917  PC1_3369  extracellular solute-binding protein family 1  21.76 
 
 
430 aa  64.3  0.000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  28.08 
 
 
437 aa  63.9  0.000000005  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_6584  ABC transporter sugar binding protein  24.67 
 
 
437 aa  60.8  0.00000005  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  26.04 
 
 
416 aa  60.1  0.00000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_013172  Bfae_25450  ABC-type sugar transport system, periplasmic component  31.62 
 
 
430 aa  60.1  0.00000009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0772443  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  24.52 
 
 
425 aa  59.3  0.0000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  28.03 
 
 
424 aa  58.9  0.0000002  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  23.58 
 
 
418 aa  58.9  0.0000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_013521  Sked_14790  ABC-type sugar transport system, periplasmic component  29.48 
 
 
424 aa  58.2  0.0000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.718562  normal  0.0502834 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  21.73 
 
 
479 aa  57  0.0000006  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  23.9 
 
 
423 aa  57  0.0000007  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  29.41 
 
 
444 aa  55.5  0.000002  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  27.8 
 
 
406 aa  55.1  0.000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  26.83 
 
 
420 aa  54.3  0.000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  30.73 
 
 
427 aa  53.9  0.000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  23.55 
 
 
421 aa  53.9  0.000006  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  27.02 
 
 
434 aa  53.9  0.000006  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_014211  Ndas_5074  extracellular solute-binding protein family 1  22.94 
 
 
447 aa  53.9  0.000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3304  extracellular solute-binding protein family 1  28.86 
 
 
441 aa  53.5  0.000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  hitchhiker  0.00753481 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  25.79 
 
 
414 aa  53.5  0.000007  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  25.49 
 
 
442 aa  53.5  0.000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1045  extracellular solute-binding protein family 1  28.99 
 
 
488 aa  53.1  0.000009  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0733801  n/a   
 
 
-
 
NC_008541  Arth_3465  extracellular solute-binding protein  26.67 
 
 
411 aa  52.4  0.00001  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  24.15 
 
 
419 aa  53.1  0.00001  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  27.01 
 
 
459 aa  52.8  0.00001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
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