| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_1688 |
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| Symbol | togB |
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| ID | 5387273 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 1961846 |
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| End bp | 1963138 |
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| Gene Length | 1293 bp |
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| Protein Length | 430 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640864669 |
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| Product | oligogalacturonide ABC transporter, periplasmic oligogalacturonide-binding protein |
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| Protein accession | YP_001400665 |
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| Protein GI | 153948392 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 0.0550228 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAAAG CGATCCTACA CACGCTAATA GCATCCACTC TGGCTCTATT GTCACATCAA
GCTTTTGCAG CACAGGACGA CGTCAATTTA CGGATGTCAT GGTGGGGAGG GAACGGCCGC
CACCAGGTAA CATTGAAAGC TCTGGAAGAA TTCCATAAAC AACATCCGAA TATTAATGTT
AAAGCGGAAT ATACCGGTTG GGATGGCCAT TTATCTCGTT TGACTACACA GATTGCAGGC
GGTACTGAAC CTGATGTCAT GCAGACTAAC TGGAACTGGC TGCCTATTTT TTCTAAAGAC
GGAACAGGAT TCTTCGATTT AAATAACGTA AAAGAACAAC TGGATTTGGC GCAATTCGAT
CCAATCGAAC TGCAACAGAC TACCGTTAAT GGCAAACTGA ATGGTATTCC GATCTCTGTT
ACTGCACGTA TATTCTATTT CAATGATGCG ACCTGGGCTA AAGCAGGTTT AGAATATCCA
AAGACATGGG ATGAGTTACT CAACGCAGGC CAAGTATTTA AAGAAAAATT GGGTGACCAA
TATTACCCTG TTGTATTAGA GCATCAAGAT ACTTTAGCGT TAATCCGTTC TTATATGACA
CAGAAATACA ATATTCCTAC CGTTGATGAA GCAAATAAGA AATTTGCCTA CACACCAGAG
CAGTGGGTTG AGTTCTTTAC CATGTACAAA AAGATGGTAG ATAGCCATGT TATGCCATCT
TCCAAATACT ATGCTTCATT CGGTAAGAGT AATATGTACG AAATGAAGCC GTGGATTAAT
GGTGAGTGGG CAGGAACTTA TATGTGGAAC TCAACCATTA CTAAATACTC TGATAACCTG
ACCAAACCTG CAAAGTTAGA TCTGGGCCCA TATCCAATGT TGCCTGATGC AAAAGATGCT
GGCTTATTCT TTAAACCTGC ACAAATGCTC TCAATTGGTA AATCAACTAA GCATCCTAAA
GAAAGTGCGA TGCTAATTAA CTTCCTGCTA AACAGCAAAG AAGGTGTTGA TGCATTAGGC
CTTGAACGCG GTGTACCGCT GAGCGCAGCA GCTGTAGCCC AATTGCGTGC CAATGGTGTG
ATTAAAGATG AAGATCCTTC TGTTGCCGGT TTGAATATGG CATTGGAATT ACCACATGAA
ATGAAGACCT CACCGTACTT CGATGATCCA CAAATTGTTT CACTGTTCGG TGATGCAATT
CAATATATAG ACTATGGTCA GAAAAGCGTA GAAGAAACAG CAGAATACTT TAATAAGCAA
GGTGATCGTA TTCTTAAACG TGCAATGCGT TAA
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| Protein sequence | MKKAILHTLI ASTLALLSHQ AFAAQDDVNL RMSWWGGNGR HQVTLKALEE FHKQHPNINV
KAEYTGWDGH LSRLTTQIAG GTEPDVMQTN WNWLPIFSKD GTGFFDLNNV KEQLDLAQFD
PIELQQTTVN GKLNGIPISV TARIFYFNDA TWAKAGLEYP KTWDELLNAG QVFKEKLGDQ
YYPVVLEHQD TLALIRSYMT QKYNIPTVDE ANKKFAYTPE QWVEFFTMYK KMVDSHVMPS
SKYYASFGKS NMYEMKPWIN GEWAGTYMWN STITKYSDNL TKPAKLDLGP YPMLPDAKDA
GLFFKPAQML SIGKSTKHPK ESAMLINFLL NSKEGVDALG LERGVPLSAA AVAQLRANGV
IKDEDPSVAG LNMALELPHE MKTSPYFDDP QIVSLFGDAI QYIDYGQKSV EETAEYFNKQ
GDRILKRAMR
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