| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Mmwyl1_0777 |
|---|
| Symbol | |
|---|
| ID | 5366586 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Marinomonas sp. MWYL1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009654 |
|---|
| Strand | + |
|---|
| Start bp | 841953 |
|---|
| End bp | 843239 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 640803113 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001339646 |
|---|
| Protein GI | 152994811 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 30 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATAA AAACAATAGC TCTGTTAGTC GGATTGGCTT CTGCTGGTTC AATGGTGAGT
GTGAATGCAA ACGCGGAAGA TTTGCGTATG TCATGGTGGG GAGGCAACTC TCGACACACA
GCAACCAATG ACGCTGTTAA AGAGTTCGAA AAAGTACATC CAGAGATTTC TGTTAAAACA
GAATACACCG GCTGGGGCGG CCATCTAGAA CGATTAACGA CTCAGATTGC GGGTAATACT
GAACCAGATG TCATGCAAAC AAACTGGAAT TGGATGCCGA TCTTCTCTGC ACGAGGAGAT
GGCTTTAAAG ATCTACGTGA ATACAGCGAC GTATTGGACC TTACTCAGTT CGATAAATCC
GCTCTTGATG CCGGAACAAA TAACGGAAAG CTCAATGGCA TCCCTGTTTC CATGGCAGCA
CGTATTTTCT ATTACAACAA AGATACATGG GCAAAAGCTG GCCTTCCATA CCCAGTAACT
TGGGAAGATT TAATGGCTGC TGGGCCTGTT TTTAAAGAAA AACTTGGCGA TGAGTTCTTT
CCTATCATTC TTGAAGGTCG TGACATCATC GCAATGAACC GTTCGTTTAT GGTTCAAAAA
TATGGCATTC CAATGATTGA TGAGGCGAAT AAAAAATTCG CTTACTCCGA TGCACAGATG
CTTGAGTTTT TCAAAATGTA TGAAGACATG GTGAAAAATC ATGTCGCGCC AAGCAGTAAA
TATGTGGCGG GCTTTGGTAA GGCTAATTTG TACGAACATA AGCCATGGAT CAATGGTGAA
TGGGCTGGTG TTTACATGTG GAACTCAGCA ATTAACAAAT ATAACGACAA CTTAAAGCCA
CCTATGTCCT TGGATATTGG CTTTTATCCA ATGAGAAAAG GCGCGACAGA TGCGGGCTTA
TTTTATAAAC CAGCGCTAAT GCTTTCTATT GGCAAAAATA GTAAGCATCC AAAAGACGCA
GCTAAGCTGA TTAACTTCCT TTTGAATGAA CCTGCCGGTT ACAACGCAAT GGGGCTAGCT
CGTGGCGTGC CTTTGAGCTT GGCGGCTCGT CGAGCTTTAT CTTTGGATGG CACTATCAAA
GATTCGGACT TATCCGTTGC TGGATTAGCG CAAATAGACG ACTTACCTAA GAATATCCTT
ACATCTGCCC ATTTTGAAAA TCCTAAGTTA TTGGGACTTT TTGAAGAGAT GATCGAAAAA
ATGGACCAAG GCGATATTAG CGTTGAAGAG GCAGCTAAAG AGTTCATGTC TCAAGGTAAT
CGTATTTTAC GTAGAGCCAT TAAATAA
|
|---|
| Protein sequence | MKIKTIALLV GLASAGSMVS VNANAEDLRM SWWGGNSRHT ATNDAVKEFE KVHPEISVKT
EYTGWGGHLE RLTTQIAGNT EPDVMQTNWN WMPIFSARGD GFKDLREYSD VLDLTQFDKS
ALDAGTNNGK LNGIPVSMAA RIFYYNKDTW AKAGLPYPVT WEDLMAAGPV FKEKLGDEFF
PIILEGRDII AMNRSFMVQK YGIPMIDEAN KKFAYSDAQM LEFFKMYEDM VKNHVAPSSK
YVAGFGKANL YEHKPWINGE WAGVYMWNSA INKYNDNLKP PMSLDIGFYP MRKGATDAGL
FYKPALMLSI GKNSKHPKDA AKLINFLLNE PAGYNAMGLA RGVPLSLAAR RALSLDGTIK
DSDLSVAGLA QIDDLPKNIL TSAHFENPKL LGLFEEMIEK MDQGDISVEE AAKEFMSQGN
RILRRAIK
|
|---|
| |