Gene Bcav_3899 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBcav_3899 
Symbol 
ID7858712 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBeutenbergia cavernae DSM 12333 
KingdomBacteria 
Replicon accessionNC_012669 
Strand
Start bp4318019 
End bp4319326 
Gene Length1308 bp 
Protein Length435 aa 
Translation table11 
GC content72% 
IMG OID643868003 
Productextracellular solute-binding protein family 1 
Protein accessionYP_002883903 
Protein GI229822377 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGGATC TTCAGCGTCG AACGTTCCTC GGGGCAGGCG CCGGCCTGCT CGCCACCGGA 
GCGCTGACCG CGTGCGGCAG CGGGAGCGGG GCCGGCGGTG GGGGAGGCGG TGGAGGCGGC
GGCGAGGACC AGGGCGCGGC GCGCGTCGCC TGGTACGGCG GCCAGCCCGT GCACGACGGC
ATGGCGGCGG CGCTCGACGC GTTCGCCTCG GACAACCCCG ACGTCGACCT CGAGACCGAG
TTCGCGGCGT TCGACGACTA CTGGGACAAG CTCGCCACCC AGACCGCCGG TGGGACGACG
CCGGACGTGT TCCGGATGTC GATGTCGTAC TTCGCCGAGT ACGCGGAGCG GGGCGCCCTG
CTCGACCTCG CGGACGCCGT CGGGAACGGC GACATCGACA CGGGCGACCT GGACGACGAC
GTCGCCGTCA GCGGCGACGT CGCGGACGGC ACGTTCGGCG TCGGGCAGAG CTCGATCGCG
TTCGCCGTCT TCGTGGACCC GGCACAGCTC GACGCCGTCG GCCTGCCGGC GCCGGACGCC
GACTGGACCT GGGACGACTA CGAGGCGCTC ACCACGGAGT TCCACGCGGC GGCCGGGGAC
GACTCGTACG GCAGCAACGA CAACGGCGGC AACATCCAGG CGTTCAGCGT CTACGCGCGG
CAGCTCGGCG GTGAGCTGTT CACGCAGGAC GGGTCGTTCG GCGTGGAGCA GGACGCCGTG
GAGGAGTGGT TCGCGCTGTG GGAGCGCCTG CGCCAGTCGG GCGCCGTCCC GCCGGCCGAC
GTCACCACGG AGTCCGCGGG GTTCGAGAAC TCGCTGCTCG TGAAGGGACG TTCGCCGCTG
CAGTTCGGCT GGGTGCAGCA GGTGACGTTC TACCAGCCGC TGACGGAGAA CCCGCTCGAG
GTGGTGACGG TGCCGTCGAT GACGAGCGGC GACCTCAGCG GGCTCTACAT CAAGGCGCTC
GACTTCTGGT GCGTGTCCGG GACCACCTCG TCGCCGGACA CCGCCGCGTC GGTCGTCGAC
TTCCTCATCA ACGACGACCG CGCGATCGAG GCGATCGGCC TCACGCTCGG CGTCCCGCCG
TCGGCGCGCG CCCGCGAGCT GCTCGGCGCC GCACCCGACT CCGCCGAGGG CAGGGCGATC
GCGTACATCG AGTCGATCAC GGACCAGGTC GGGGCGCCGC CTCCGGCGTG GCCGAGCGGG
TACAGCGCGG TGTCCGACGC GTTCGCCCGG GCGAACGAGG GCATCGCGTT CGGGGATCTC
GACGCCGCCG GCGCGGCAGC CCAGGTCATG GAGGCCGCCG CGCGATGA
 
Protein sequence
MKDLQRRTFL GAGAGLLATG ALTACGSGSG AGGGGGGGGG GEDQGAARVA WYGGQPVHDG 
MAAALDAFAS DNPDVDLETE FAAFDDYWDK LATQTAGGTT PDVFRMSMSY FAEYAERGAL
LDLADAVGNG DIDTGDLDDD VAVSGDVADG TFGVGQSSIA FAVFVDPAQL DAVGLPAPDA
DWTWDDYEAL TTEFHAAAGD DSYGSNDNGG NIQAFSVYAR QLGGELFTQD GSFGVEQDAV
EEWFALWERL RQSGAVPPAD VTTESAGFEN SLLVKGRSPL QFGWVQQVTF YQPLTENPLE
VVTVPSMTSG DLSGLYIKAL DFWCVSGTTS SPDTAASVVD FLINDDRAIE AIGLTLGVPP
SARARELLGA APDSAEGRAI AYIESITDQV GAPPPAWPSG YSAVSDAFAR ANEGIAFGDL
DAAGAAAQVM EAAAR