Gene Sked_03450 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSked_03450 
Symbol 
ID8631983 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSanguibacter keddieii DSM 10542 
KingdomBacteria 
Replicon accessionNC_013521 
Strand
Start bp383143 
End bp384393 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content70% 
IMG OID 
ProductABC-type sugar transport system, periplasmic component 
Protein accessionYP_003313146 
Protein GI269793691 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.355174 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCCGGTG CCCTGGCCGT GGTGCTCCTG ACGGCAGGGT GCTCCAGCGG CGACGCCGAC 
GCCGGCGGCA AGACGGTCAT CGACTTCACG TGGTGGGGCG ACGTGTCCCG CGCCGAGCGC
TACGAGGAGG CCGTGGCGGT CTTCGAGAAG GAGAACCCCG ACATCGACGT CCGCACCAGC
TACGGCGCGT GGGACAGCTA CTGGTCCTCG CGCAACGTCG AGGCCGCGAG CGGGAACCTG
CCCGACGTCA TGCAGATGGA CATCGCCTAC GTCACCGAGT ACGGCTCGAC CGGGCGCCTC
GCGCCCCTCG ACGAGCACAT CGGCAGCACC ATCGACGTGA GCACCCTGCC CGACACCCTC
CTGCCCACCG GGCAGATCGA CGGGACCACC GTCGCGATCC CCACGAGCAC CGCGACGCTC
GCGACCATGG TCAACACCGA CCTCTTCACC GAGCTCGGCG TCGACGTCCC GACCGAGCCG
CTCACCTGGG ACGAGTACGA CACGCTCCTC GGCGACCTCG CGACCGCCGG TGCGTCCGGC
GACCCGACGG TCTACGGGTC GGTCGACTAC ACGCAGATCT TCTGGCTGTT CCAGATCTGG
CTCGGCCAGC AGGGCAAGAC GATGTTCGAC GGCGACGCCC TCGGCTTCGA CGAGTCCGAC
CTCGCCACCT GGTGGGAGCG CGCGCAGCCC TTGCACGCGG ACGGCACCTT CATGCCGCCG
GCGCGCCTCA CCCAGCTCGA GGGCGTCGAC GCCCTCGGCA TCGGGGAGAC CGCGTCGGAG
ATCAGCTGGG ACAACTTCCT GGTGCGCTTC AGCGAGGGCA GCCGCAGCGG CACCCTCGAG
CTGCTGCAGC CGCCCGCCGA CGACCCCGAC CAGTCCGGGC TGTTCCTCAA GCCGTCGCTG
CTGCTGTCGG TGGGGGCGAA CACGGAGCAC CCCGAGGAGT CGGCGAAGCT GGTCGACTTC
CTCACCAACA GCCCCGAGGT CGGCGAGATC TTCGGGATGT CGCGGGGCGT CCCGTCGTCG
AGCAGTGCCA TCGAGGGCTT CGAGCCCGAG GGCCTCGACC TGCAGATCCT CGAGTACGAG
CAGTCCCTCG AGCCGTACCT CACCAGCTCC CCGCCGCCGC CCGTCTCGGG CTTCGGCACC
CTCGAGTCCA CGTTCGTCCG CCTCAGCGAG GAGCTCGGCT ACGGGACGAT GACGGTCGAC
CAGGCCGTCG AGCAGTGGTT CGCCGAGGCC GAGAGCGTCC TGGCGAGCTG A
 
Protein sequence
MAGALAVVLL TAGCSSGDAD AGGKTVIDFT WWGDVSRAER YEEAVAVFEK ENPDIDVRTS 
YGAWDSYWSS RNVEAASGNL PDVMQMDIAY VTEYGSTGRL APLDEHIGST IDVSTLPDTL
LPTGQIDGTT VAIPTSTATL ATMVNTDLFT ELGVDVPTEP LTWDEYDTLL GDLATAGASG
DPTVYGSVDY TQIFWLFQIW LGQQGKTMFD GDALGFDESD LATWWERAQP LHADGTFMPP
ARLTQLEGVD ALGIGETASE ISWDNFLVRF SEGSRSGTLE LLQPPADDPD QSGLFLKPSL
LLSVGANTEH PEESAKLVDF LTNSPEVGEI FGMSRGVPSS SSAIEGFEPE GLDLQILEYE
QSLEPYLTSS PPPPVSGFGT LESTFVRLSE ELGYGTMTVD QAVEQWFAEA ESVLAS