| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Aaci_0913 |
|---|
| Symbol | |
|---|
| ID | 8424406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013205 |
|---|
| Strand | + |
|---|
| Start bp | 989971 |
|---|
| End bp | 991236 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 645027026 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003184342 |
|---|
| Protein GI | 258510908 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 25 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGGAAAC CATTTCTTGG GATCGCGGGT GCGGCAGTGG TCGCGATGGG CGCGGTGACG
GCATGCGGCC AGGCGCAGAG CGCGCCCTCC AACCAGGCGA ACGTCGGCAG CGCGTCGGCG
GCGCCCATTC ATCTGACGCT TGGCATGTGG GCGTCGAGCC CGGCGGAAAA GCAGCTCGTG
GAGCGTCAGA TTGCCTTGTT TGAGAAGGAA AATCCGAACA TCAAGGTGAG CATCCAGGTC
ATCACGGGCA ACTACCTGCA GGCGCTGCAG CCGATGCTCG CCGCGCACGA CGCGCCGGAC
ATCTTCTACG TGGATTCGTC CTACGCGCCG ACGCTCGAGG CTTCGGGCGC CATCATGCCG
CTCGACAGCT TCATCAAGCA GGATCATGTC GATTTGTCCG ACTTCCAGAA GAACCTGCTC
GACGCGTTCA CCTGGCAGGG GCACATCTAC GGCCTGCCGA AGGACATGAA CACGATGGCC
TTGGAGTACA ACCCGGCGCT CCTCGCCAAG GCGGGCATCC AGTCGCCGCC GAAGACGTTC
GCGCAGTTTG ACCAGGACGC CGCGAAGCTC AAGGCCAAGG GCATTGTGCC GCTGGACATG
CCGATTGACG TGGCGCGCTA TTATCCGTTC ATCGTCGACA TGGGCGGGAG CTACTACAAC
AAGGCCACGA ACCAGGCCAC CTTCACCAAC AAGGCGAACG TCGCGGGCCT CACGTGGTTT
ATGAAAGAGA TGGAAAGCGG CAACTTCGTG ACCCCGCAAG ACCAAGGCGG GTCCTGGGCG
GGTGTCCCGT TCGCAGAGGG CAAGGCGGCG ATGGCCCTTG AGGGCGCTTG GATTGTGCCG
TTCATGCAGC AGACCGCGCC GAAGATGAAG TACGGCATTG CGGACTTCCC GTCGCTCAAC
GGGCACGATG CGAACATGCT GTTTACGGTC GCGTACGAGA TGTCGAAGTA CGCGAAGAAC
CCGGATGCTG CCGCGAAGTT GCTCTTCTTC ATGACGGGCA AAGAGGCGCT CAAGATGACG
GCCGATTCGG GCCTCGCCAT TCCCTCTCGG ACCAGCGAGC AGGGCGAGTT TCTGAAGAAG
TATCCGTCGT ACAAGGGCTT CGTGGACGGT CTCAAGGGCG CCATTCCGTA TCAGTTCGGC
ACGCTCGGGC AGAACTTCCT CGACGCCATC AACAATGCCA CGCAACAAGG CATTCTGAAG
AAGGAGTCGG CGCAGCAAGT CTTGAGTCAG GCGCAGCAGA CGCTCGCTTC ACAGATGAAC
GACTGA
|
|---|
| Protein sequence | MRKPFLGIAG AAVVAMGAVT ACGQAQSAPS NQANVGSASA APIHLTLGMW ASSPAEKQLV
ERQIALFEKE NPNIKVSIQV ITGNYLQALQ PMLAAHDAPD IFYVDSSYAP TLEASGAIMP
LDSFIKQDHV DLSDFQKNLL DAFTWQGHIY GLPKDMNTMA LEYNPALLAK AGIQSPPKTF
AQFDQDAAKL KAKGIVPLDM PIDVARYYPF IVDMGGSYYN KATNQATFTN KANVAGLTWF
MKEMESGNFV TPQDQGGSWA GVPFAEGKAA MALEGAWIVP FMQQTAPKMK YGIADFPSLN
GHDANMLFTV AYEMSKYAKN PDAAAKLLFF MTGKEALKMT ADSGLAIPSR TSEQGEFLKK
YPSYKGFVDG LKGAIPYQFG TLGQNFLDAI NNATQQGILK KESAQQVLSQ AQQTLASQMN
D
|
|---|
| |