| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_4984 |
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| Symbol | |
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| ID | 8336338 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | + |
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| Start bp | 5701558 |
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| End bp | 5702856 |
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| Gene Length | 1299 bp |
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| Protein Length | 432 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 644958083 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003115685 |
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| Protein GI | 256394121 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000108283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 0.000897425 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGACAA GACGTGTTCG GCTGGCCTGC CTCACCCTTT CCGCCATCTC CCTGCTCACC
GTCGCGCTGA CGGGATGCTC CTCCTCGAGC GGATCGGGAT CCGGCGCCAA GAACGTCGCG
CTGCGGATGA CCGTCTGGAG CAACGACAAA TCGCAGACAG CGCTGTTCAA CAGCATCGCG
GACAGCTACC TCAAGACCCA TCCCGACATC AAGTCGATCA CGTTCGACTA CCTCCCGATC
GGCAGCTACA CGACCGCGCT GACGACCCAG ATCGCCGGCA GCAGCCCGCC GGACATGGCC
TGGATCCTGG AGCGGGACGC GCCGGACTTC GTCTCCTCCG GAGCGCTCAC CGACGTCTCG
GCGGCCCTGC AGAACTCCCC CGGCTACCAG TACGGCGACC TGACCCCGGC AGCGACCAAG
CTGTGGACGC AGAATGGGAA GCTCTACGCC TACCCCTTCT CCACGTCCCC GTTCGGGATG
TTCTACAACA AGGACCTGCT GACCCAAGCC GGTGTGACCC AGACGCCGGA CCAGCTCGTC
GCCGCCGGCC AGTGGACGTG GCAGAACGCC GAGAAGATGG CCGCCCAGGT CGCGGCGCAC
ACCGACAAGC AGGGTCTGGT GATCCGGGAC TGGGACTACA AGACCTGGAT CGAGCTGGCG
AGCATCTGGC GCGGCTGGGG CGCCGACGCC TGGTCGGCCG ACGGCAAGAC CTGTGACTTC
GACGCCCCGC AGATGCAGCA GGCGATGACC TTCCTGCACA ACGCGATCTT CACCGACAAG
GCGCTGCCCG CACCGGGCCA GACCGCTGAC TTCTTCGCCG GTGAGTCCGC CATGACCGTC
ACTCAGATCA GCCGGGCTTC CCTGCTGGCC AAGCACCCGT TCAACTGGGG GATCGTGCCG
CTGCCGTCTG GTCCGACCGG GTCGGCGCAG GTCATCGGAC AGGCCGGCAT CGGTGTGATG
ACCAAGGGTT CGCACAAGCA GCAGGCGGCG GACTTCCTGG CCTACTTCAC CGACCCGGCC
AACTCCGCCA AGCTCGCCCA GTACTTCCCG CCGGCTCGTC AGAGCCAGCT CAACACCACG
ACCCTAGCCG CCGCGAATCC CCTGTTCACC CCGCAGCAAC TTCAGGATGT GGTCATCAAC
GGCATCAAGA CCGGCTCGGT GCTGCCGTCC CATGAGAACA GCGCCAAGCT CGCCACCCTC
GTGCAGAACG CCTTGGACCC GCTGTGGACG CCCGGAGCCA ACGTCGACTC AGTGCTCGCC
GGGGTGTGCA AGGCGATCGA CCCGGCTCTG AGCCAGTGA
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| Protein sequence | MKTRRVRLAC LTLSAISLLT VALTGCSSSS GSGSGAKNVA LRMTVWSNDK SQTALFNSIA
DSYLKTHPDI KSITFDYLPI GSYTTALTTQ IAGSSPPDMA WILERDAPDF VSSGALTDVS
AALQNSPGYQ YGDLTPAATK LWTQNGKLYA YPFSTSPFGM FYNKDLLTQA GVTQTPDQLV
AAGQWTWQNA EKMAAQVAAH TDKQGLVIRD WDYKTWIELA SIWRGWGADA WSADGKTCDF
DAPQMQQAMT FLHNAIFTDK ALPAPGQTAD FFAGESAMTV TQISRASLLA KHPFNWGIVP
LPSGPTGSAQ VIGQAGIGVM TKGSHKQQAA DFLAYFTDPA NSAKLAQYFP PARQSQLNTT
TLAAANPLFT PQQLQDVVIN GIKTGSVLPS HENSAKLATL VQNALDPLWT PGANVDSVLA
GVCKAIDPAL SQ
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