| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_3575 |
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| Symbol | |
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| ID | 5387632 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 4034596 |
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| End bp | 4035909 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 640866591 |
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| Product | carbohydrate ABC transporter periplasmic-binding protein |
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| Protein accession | YP_001402529 |
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| Protein GI | 153949270 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 52 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAGACGC AAATGATAAT GTCAAAAGTA AAAATAAAGT CTTTGCTGTT GTTAACTTAT
TTAGCCATGG GGATCCCTTC TCTTCACGCC GCAGAAACAT TGCAAGTGTG GATCCGTGCA
AGTAATGACT CTAAAAACAT TTATAAAAAA GAAGCTGACA CGTTTGAGAA AAAAACCGGT
ATCAAAATTG AATATTTCAA TGCCACGACT GATTTTGAAC AACGTCTGGC ACGGGCCGCT
GCGGGCAACG CGCTACCCGA TCTGATTTTC AACGATGCCG TGGCTATTGG TCAGTTTGTG
CAGCTAGGGA TTGTCGAACC GATTGAACCA AAAAATATTA TTGGCGGAGA GAACATCTTC
GATACCGCCT GGAAAAGTAC CCAATATATT GATGGAAAAT ATTACGGGGT TCCCACCTCC
GCTCAAACCT TTGCCTTATT TGTTCGCAAA GACTGGCGGG AAAAGTTGGG CTTAGAGCAA
CCGAAGAACT GGCAAGACAT TAGCACGCTG GCGAAAGCCT TTACCTTTAA TGACCCCGAT
GGCAACGGTA AAAATGATAC TTACGGCTTT ATTTTGCCGG GTTCAACAAC CCGTGGCTAC
GCCAGTTGGT TTATCAGCTC CTACCTTTGG CAGGCGGGGG GTGACTTTAT TCGCCCAGCC
GGTGAAGGTA AATTTATTGC CTCGCTGGAG GAGCCAGCAG CCACTGAAAC CCTGAGTTTC
ATGCGCGGAA TGGTGTGCGA TAAAACAGTC CAGCCGGGGG CTATCAATGC GACCACCGCT
GATGCGATCC CTTCATTCCG TTCTGGCCAA AGTGGCATGT TCTTCTCCGG CCCATATCAC
ATCGCGTTGT TTGATAAAGA TCCCGGCACC GAGGCTTTTG AAGTGATCCC GCCACCGACA
GGGCCAAAAG GACAGGCTAC GTTGGCTGAA GGCACTACGG TCTTTATGAT GAAAAGCAGC
CAGAAAAAAG CAGCCGCTCA GAAATTCATT GAGTTCATGA TCTCCCCTGA AGGGCAGCAG
ATCGGCATGG GAATGGGCAC CAAAAACATG CCAGTCGTGC GCTTGTCGAT CAATAAATTG
GTGGATACCA AAGCGGTCTA TGACGATCCA CGTTGGGCCA TGTTCGCCGA TCTGTATGCC
GAACAGGGCC GCTATATTCC ACAAGTTCCT AACTGGACAC CTATTCGTCA GGTCACCGCT
GAAGGTTTCA ACCGTATTTT AGCCAACTGT GACAGTGATA TCGCCGCAGA ATTAAAAGCG
GTGAATCAGA AAGTTAATGA TGAGTTGGCT AAACAGAACG TCTTAGGGCA GTGA
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| Protein sequence | MKTQMIMSKV KIKSLLLLTY LAMGIPSLHA AETLQVWIRA SNDSKNIYKK EADTFEKKTG
IKIEYFNATT DFEQRLARAA AGNALPDLIF NDAVAIGQFV QLGIVEPIEP KNIIGGENIF
DTAWKSTQYI DGKYYGVPTS AQTFALFVRK DWREKLGLEQ PKNWQDISTL AKAFTFNDPD
GNGKNDTYGF ILPGSTTRGY ASWFISSYLW QAGGDFIRPA GEGKFIASLE EPAATETLSF
MRGMVCDKTV QPGAINATTA DAIPSFRSGQ SGMFFSGPYH IALFDKDPGT EAFEVIPPPT
GPKGQATLAE GTTVFMMKSS QKKAAAQKFI EFMISPEGQQ IGMGMGTKNM PVVRLSINKL
VDTKAVYDDP RWAMFADLYA EQGRYIPQVP NWTPIRQVTA EGFNRILANC DSDIAAELKA
VNQKVNDELA KQNVLGQ
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