| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmob_0523 |
|---|
| Symbol | |
|---|
| ID | 5758511 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Petrotoga mobilis SJ95 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010003 |
|---|
| Strand | + |
|---|
| Start bp | 569318 |
|---|
| End bp | 570568 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 641301722 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_001567580 |
|---|
| Protein GI | 160901999 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAAAGT TTTTTGTAGT GTTGGTATGT TTGATTATCA GTTCGTTGAT GCTATCAGCA
AAAAGTGTAA CTGTTGAATT TTGGACACTT TCTTTGTCTA CATTTTCAGA TTACATTAAC
TCAGTCATAG ATACTTTCGA AGCTGCAAAT CCTGACATAA AAATCAACTG GGTCGACGTT
CCTTACGATG CTTTTCAACA AAAACTCATT GCTGCAATAG CCTCTGGTAA CCCGCCTGAT
CTGGTGAATA TGAATACTCC TTGGGTTATA GACTTTGCAG CTCAAGATGC ATTAAGCCCT
ATCGATGAAT TCGTAACTGA AGTGGACAAA TACTTATACT TACCTAACTA CTGGGAAGCT
ACCGTCATAG ATGGAAAATC ATATGCTATT CCTTGGTATC TAAGTCCCCA AATTATGCTT
TACAACAAAC AGATTTTTGA AGAAGCGGGT TTAGACCCTA ATGTTCCACC AAAGACATGG
GATGAAATCA TAGAATATTC AAGGATAATT AAAGAAAAAA CTGGCCTATA CGGATATCAA
CCCAACATTG TTGCGCATAT CGATCTTCAG GAAGAGGGCG TCCCGTTAAT TTCTGAAGAT
GGAAAAAAGG CTATAGTAAA CACCCCTGAG GCAATGGCTA AATTGAAACA ACATCAACTT
GCCTTCAAAG AGGCACTTAT GCCTCAAGAT TTAGGAGGTT ATCAAGCCGG TACCCAAAAG
TATGCCGGTG GGAGAATTGC CATGTTTCCT GTTGGAATAA CTATGGTTAA ACATGTCCAA
ATAAATAGTC CAAGTATATT CGAAGTTAGT GATGTTACTT CCTTCCCTCT GGGAAAAGGT
AAAAAAATTC CTGCGGGAGC AATGAATGTG GCAGTGCCAT ACAATGCGAA AAATAAAGCT
GAAGCGGTAA AATTTGGATT ATGGCTAACT TCTCCATATT GGCAAGTGGA GTTCGCTAAG
ATTGCAACAG TTGTTCCCTC AACAAAAATA TCGCTCGAAG AAGATCCTTG GTTTTTAGAA
AGGGCAGAAA GAGATTTGAA TGTTAAAGCA CAATTAGTAG CTAGTGAATC AATGATATAT
GGTTTTGATC AAGATGCAAT CGGGAAAATA ATAGGGCCAG CGAAATATTC TGAATTCAGA
AGGATCTTAG ATGATTATTG GATACCTGCT ATTAAAGGTG ATTACACAGC CGAAGAAGCA
TTATCCTTAG CTGAAGAAGA GTTAGATGAT CTACTATCCA GTGAATTTTA G
|
|---|
| Protein sequence | MKKFFVVLVC LIISSLMLSA KSVTVEFWTL SLSTFSDYIN SVIDTFEAAN PDIKINWVDV
PYDAFQQKLI AAIASGNPPD LVNMNTPWVI DFAAQDALSP IDEFVTEVDK YLYLPNYWEA
TVIDGKSYAI PWYLSPQIML YNKQIFEEAG LDPNVPPKTW DEIIEYSRII KEKTGLYGYQ
PNIVAHIDLQ EEGVPLISED GKKAIVNTPE AMAKLKQHQL AFKEALMPQD LGGYQAGTQK
YAGGRIAMFP VGITMVKHVQ INSPSIFEVS DVTSFPLGKG KKIPAGAMNV AVPYNAKNKA
EAVKFGLWLT SPYWQVEFAK IATVVPSTKI SLEEDPWFLE RAERDLNVKA QLVASESMIY
GFDQDAIGKI IGPAKYSEFR RILDDYWIPA IKGDYTAEEA LSLAEEELDD LLSSEF
|
|---|
| |