Gene Pmob_0523 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPmob_0523 
Symbol 
ID5758511 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePetrotoga mobilis SJ95 
KingdomBacteria 
Replicon accessionNC_010003 
Strand
Start bp569318 
End bp570568 
Gene Length1251 bp 
Protein Length416 aa 
Translation table11 
GC content38% 
IMG OID641301722 
Productextracellular solute-binding protein 
Protein accessionYP_001567580 
Protein GI160901999 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAAGT TTTTTGTAGT GTTGGTATGT TTGATTATCA GTTCGTTGAT GCTATCAGCA 
AAAAGTGTAA CTGTTGAATT TTGGACACTT TCTTTGTCTA CATTTTCAGA TTACATTAAC
TCAGTCATAG ATACTTTCGA AGCTGCAAAT CCTGACATAA AAATCAACTG GGTCGACGTT
CCTTACGATG CTTTTCAACA AAAACTCATT GCTGCAATAG CCTCTGGTAA CCCGCCTGAT
CTGGTGAATA TGAATACTCC TTGGGTTATA GACTTTGCAG CTCAAGATGC ATTAAGCCCT
ATCGATGAAT TCGTAACTGA AGTGGACAAA TACTTATACT TACCTAACTA CTGGGAAGCT
ACCGTCATAG ATGGAAAATC ATATGCTATT CCTTGGTATC TAAGTCCCCA AATTATGCTT
TACAACAAAC AGATTTTTGA AGAAGCGGGT TTAGACCCTA ATGTTCCACC AAAGACATGG
GATGAAATCA TAGAATATTC AAGGATAATT AAAGAAAAAA CTGGCCTATA CGGATATCAA
CCCAACATTG TTGCGCATAT CGATCTTCAG GAAGAGGGCG TCCCGTTAAT TTCTGAAGAT
GGAAAAAAGG CTATAGTAAA CACCCCTGAG GCAATGGCTA AATTGAAACA ACATCAACTT
GCCTTCAAAG AGGCACTTAT GCCTCAAGAT TTAGGAGGTT ATCAAGCCGG TACCCAAAAG
TATGCCGGTG GGAGAATTGC CATGTTTCCT GTTGGAATAA CTATGGTTAA ACATGTCCAA
ATAAATAGTC CAAGTATATT CGAAGTTAGT GATGTTACTT CCTTCCCTCT GGGAAAAGGT
AAAAAAATTC CTGCGGGAGC AATGAATGTG GCAGTGCCAT ACAATGCGAA AAATAAAGCT
GAAGCGGTAA AATTTGGATT ATGGCTAACT TCTCCATATT GGCAAGTGGA GTTCGCTAAG
ATTGCAACAG TTGTTCCCTC AACAAAAATA TCGCTCGAAG AAGATCCTTG GTTTTTAGAA
AGGGCAGAAA GAGATTTGAA TGTTAAAGCA CAATTAGTAG CTAGTGAATC AATGATATAT
GGTTTTGATC AAGATGCAAT CGGGAAAATA ATAGGGCCAG CGAAATATTC TGAATTCAGA
AGGATCTTAG ATGATTATTG GATACCTGCT ATTAAAGGTG ATTACACAGC CGAAGAAGCA
TTATCCTTAG CTGAAGAAGA GTTAGATGAT CTACTATCCA GTGAATTTTA G
 
Protein sequence
MKKFFVVLVC LIISSLMLSA KSVTVEFWTL SLSTFSDYIN SVIDTFEAAN PDIKINWVDV 
PYDAFQQKLI AAIASGNPPD LVNMNTPWVI DFAAQDALSP IDEFVTEVDK YLYLPNYWEA
TVIDGKSYAI PWYLSPQIML YNKQIFEEAG LDPNVPPKTW DEIIEYSRII KEKTGLYGYQ
PNIVAHIDLQ EEGVPLISED GKKAIVNTPE AMAKLKQHQL AFKEALMPQD LGGYQAGTQK
YAGGRIAMFP VGITMVKHVQ INSPSIFEVS DVTSFPLGKG KKIPAGAMNV AVPYNAKNKA
EAVKFGLWLT SPYWQVEFAK IATVVPSTKI SLEEDPWFLE RAERDLNVKA QLVASESMIY
GFDQDAIGKI IGPAKYSEFR RILDDYWIPA IKGDYTAEEA LSLAEEELDD LLSSEF