More than 300 homologs were found in PanDaTox collection
for query gene Caci_3703 on replicon NC_013131
Organism: Catenulispora acidiphila DSM 44928



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013131  Caci_3703  extracellular solute-binding protein family 1  100 
 
 
466 aa  954    Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0104923  normal 
 
 
-
 
NC_013595  Sros_5409  ABC-type sugar transport system periplasmic component-like protein  44.69 
 
 
457 aa  362  1e-98  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_8464  extracellular solute-binding protein family 1  44.58 
 
 
481 aa  350  3e-95  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.635867  normal  0.0842744 
 
 
-
 
NC_013521  Sked_27350  ABC-type sugar transport system, periplasmic component  36.38 
 
 
444 aa  204  3e-51  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.404715  normal  0.481515 
 
 
-
 
NC_012669  Bcav_0910  extracellular solute-binding protein family 1  31.91 
 
 
466 aa  195  1e-48  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.764586  normal 
 
 
-
 
NC_013530  Xcel_0063  extracellular solute-binding protein family 1  33.12 
 
 
475 aa  179  1e-43  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_1095  extracellular solute-binding protein family 1  30.16 
 
 
530 aa  172  1e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013526  Tter_2526  extracellular solute-binding protein family 1  29.82 
 
 
520 aa  171  2e-41  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000430481  n/a   
 
 
-
 
NC_013947  Snas_4693  extracellular solute-binding protein family 1  32.7 
 
 
457 aa  171  3e-41  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.363745 
 
 
-
 
NC_010001  Cphy_3317  extracellular solute-binding protein  25.98 
 
 
492 aa  113  8.000000000000001e-24  Clostridium phytofermentans ISDg  Bacteria  unclonable  0.0000000142443  n/a   
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  30.33 
 
 
442 aa  103  7e-21  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_011661  Dtur_0175  extracellular solute-binding protein family 1  24.35 
 
 
458 aa  99  1e-19  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  28.1 
 
 
415 aa  98.2  3e-19  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_3944  extracellular solute-binding protein  31.9 
 
 
464 aa  92  2e-17  Frankia sp. EAN1pec  Bacteria  normal  0.920276  normal  0.0416082 
 
 
-
 
NC_013411  GYMC61_2845  extracellular solute-binding protein family 1  25 
 
 
439 aa  83.6  0.000000000000008  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013131  Caci_4993  extracellular solute-binding protein family 1  28.24 
 
 
432 aa  82  0.00000000000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.0450999  normal  0.012477 
 
 
-
 
NC_004311  BRA1180  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.75 
 
 
421 aa  80.5  0.00000000000006  Brucella suis 1330  Bacteria  normal  0.409061  n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  24.79 
 
 
423 aa  80.1  0.00000000000008  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  34.27 
 
 
402 aa  79.7  0.0000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_009620  Smed_4159  extracellular solute-binding protein  28.14 
 
 
421 aa  79.3  0.0000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.119299  normal  0.873951 
 
 
-
 
NC_011369  Rleg2_3669  extracellular solute-binding protein family 1  35.88 
 
 
492 aa  79.7  0.0000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  23.01 
 
 
445 aa  78.2  0.0000000000003  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  26.75 
 
 
412 aa  77.4  0.0000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  26.51 
 
 
444 aa  77.4  0.0000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
NC_011981  Avi_7590  ABC transporter substrate binding protein (sugar)  28.88 
 
 
447 aa  77  0.0000000000006  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1711  extracellular solute-binding protein family 1  26.13 
 
 
454 aa  76.6  0.0000000000008  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.795485  normal 
 
 
-
 
NC_007777  Francci3_2834  extracellular solute-binding protein  33.33 
 
 
459 aa  76.3  0.000000000001  Frankia sp. CcI3  Bacteria  normal  0.873121  normal 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  27.27 
 
 
412 aa  75.5  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  24.25 
 
 
407 aa  74.7  0.000000000003  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_009667  Oant_2485  extracellular solute-binding protein  32.61 
 
 
415 aa  74.3  0.000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  decreased coverage  0.00421769  n/a   
 
 
-
 
NC_012848  Rleg_4863  extracellular solute-binding protein family 1  35.5 
 
 
492 aa  73.9  0.000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.426159 
 
 
-
 
NC_013739  Cwoe_3957  extracellular solute-binding protein family 1  26.44 
 
 
432 aa  73.9  0.000000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_013205  Aaci_0795  extracellular solute-binding protein family 1  23.04 
 
 
460 aa  73.6  0.000000000007  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  0.215252  n/a   
 
 
-
 
NC_009667  Oant_1666  extracellular solute-binding protein  26.11 
 
 
421 aa  73.6  0.000000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_011773  BCAH820_0625  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.92 
 
 
458 aa  73.2  0.000000000008  Bacillus cereus AH820  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  25.26 
 
 
436 aa  73.2  0.000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_005945  BAS0538  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  24.6 
 
 
458 aa  72.8  0.00000000001  Bacillus anthracis str. Sterne  Bacteria  normal  0.406699  n/a   
 
 
-
 
NC_005957  BT9727_0480  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.6 
 
 
458 aa  72.8  0.00000000001  Bacillus thuringiensis serovar konkukian str. 97-27  Bacteria  normal  n/a   
 
 
-
 
NC_006274  BCZK0482  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.6 
 
 
458 aa  72.8  0.00000000001  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_007530  GBAA_0569  glycerol-3-phosphate ABC transporter glycerol-3-phosphate-binding protein  24.6 
 
 
458 aa  72.8  0.00000000001  Bacillus anthracis str. 'Ames Ancestor'  Bacteria  normal  n/a   
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  27.72 
 
 
454 aa  72.8  0.00000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_003909  BCE_0632  glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein, putative  24.27 
 
 
458 aa  72  0.00000000002  Bacillus cereus ATCC 10987  Bacteria  normal  n/a   
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  27.38 
 
 
417 aa  72  0.00000000002  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_011725  BCB4264_A0606  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.6 
 
 
458 aa  71.2  0.00000000003  Bacillus cereus B4264  Bacteria  normal  n/a   
 
 
-
 
NC_011658  BCAH187_A0700  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.76 
 
 
458 aa  71.6  0.00000000003  Bacillus cereus AH187  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  28.81 
 
 
421 aa  70.5  0.00000000006  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_011772  BCG9842_B4733  putative glycerol-3-phosphate ABC transporter, glycerol-3-phosphate-binding protein  24.43 
 
 
458 aa  70.5  0.00000000007  Bacillus cereus G9842  Bacteria  normal  normal 
 
 
-
 
NC_007777  Francci3_2252  extracellular solute-binding protein  27.12 
 
 
469 aa  70.1  0.00000000008  Frankia sp. CcI3  Bacteria  hitchhiker  0.00844632  hitchhiker  0.0063434 
 
 
-
 
NC_008751  Dvul_0224  extracellular solute-binding protein  25.21 
 
 
431 aa  70.1  0.00000000008  Desulfovibrio vulgaris DP4  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1485  MalE-type ABC sugar transport system periplasmic component  33.51 
 
 
429 aa  69.7  0.0000000001  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  23.88 
 
 
427 aa  68.6  0.0000000002  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_007778  RPB_0174  extracellular solute-binding protein  28.09 
 
 
426 aa  67.8  0.0000000004  Rhodopseudomonas palustris HaA2  Bacteria  normal  0.396862  normal 
 
 
-
 
NC_011369  Rleg2_1773  extracellular solute-binding protein family 1  28.16 
 
 
421 aa  67.8  0.0000000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal  0.0165592 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  25.18 
 
 
447 aa  67.8  0.0000000004  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_012854  Rleg_6528  extracellular solute-binding protein family 1  26.18 
 
 
415 aa  67.4  0.0000000005  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.0147922 
 
 
-
 
NC_012669  Bcav_1708  extracellular solute-binding protein family 1  26.33 
 
 
458 aa  67.4  0.0000000005  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_009636  Smed_2146  extracellular solute-binding protein  25.79 
 
 
414 aa  67.8  0.0000000005  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_007958  RPD_3151  extracellular solute-binding protein  28.09 
 
 
426 aa  67  0.0000000006  Rhodopseudomonas palustris BisB5  Bacteria  normal  normal  0.345086 
 
 
-
 
NC_011769  DvMF_0656  extracellular solute-binding protein family 1  24.04 
 
 
431 aa  67.4  0.0000000006  Desulfovibrio vulgaris str. 'Miyazaki F'  Bacteria  n/a    normal  0.31335 
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  28.14 
 
 
416 aa  67  0.0000000007  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  28.57 
 
 
419 aa  67  0.0000000007  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  28.77 
 
 
444 aa  66.6  0.0000000009  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_011004  Rpal_0129  extracellular solute-binding protein family 1  28.76 
 
 
426 aa  66.6  0.0000000009  Rhodopseudomonas palustris TIE-1  Bacteria  normal  0.57996  n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  25.46 
 
 
411 aa  66.6  0.000000001  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013525  Tter_0829  extracellular solute-binding protein family 1  28.98 
 
 
504 aa  65.9  0.000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_013205  Aaci_0770  extracellular solute-binding protein family 1  26.27 
 
 
444 aa  65.9  0.000000001  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_010003  Pmob_0289  extracellular solute-binding protein  23.41 
 
 
437 aa  65.5  0.000000002  Petrotoga mobilis SJ95  Bacteria  unclonable  0.00000019091  n/a   
 
 
-
 
NC_009429  Rsph17025_3553  hypothetical protein  25.5 
 
 
427 aa  65.5  0.000000002  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  normal 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  25.94 
 
 
366 aa  65.9  0.000000002  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_009921  Franean1_1895  extracellular solute-binding protein  28.47 
 
 
445 aa  65.1  0.000000002  Frankia sp. EAN1pec  Bacteria  normal  0.854658  normal 
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  25.81 
 
 
443 aa  64.3  0.000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  23.94 
 
 
410 aa  63.9  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  23.94 
 
 
410 aa  63.9  0.000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_011988  Avi_6240  ABC transporter substrate binding protein (maltose)  35.83 
 
 
407 aa  63.9  0.000000006  Agrobacterium vitis S4  Bacteria  normal  0.0994607  n/a   
 
 
-
 
NC_010003  Pmob_0721  extracellular solute-binding protein  23.08 
 
 
437 aa  63.9  0.000000006  Petrotoga mobilis SJ95  Bacteria  normal  0.540981  n/a   
 
 
-
 
NC_008699  Noca_0059  extracellular solute-binding protein  27.03 
 
 
439 aa  63.5  0.000000007  Nocardioides sp. JS614  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1696  extracellular solute-binding protein  23.79 
 
 
436 aa  63.5  0.000000008  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.00506774  n/a   
 
 
-
 
NC_013205  Aaci_0075  extracellular solute-binding protein family 1  24.92 
 
 
441 aa  63.5  0.000000008  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25 
 
 
411 aa  63.5  0.000000008  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0753  extracellular solute-binding protein  25.19 
 
 
437 aa  62.4  0.00000001  Thermosipho melanesiensis BI429  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  28.32 
 
 
406 aa  62.4  0.00000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_011366  Rleg2_5687  extracellular solute-binding protein family 1  39 
 
 
401 aa  62.4  0.00000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.627079  normal 
 
 
-
 
NC_013131  Caci_6732  extracellular solute-binding protein family 1  27.27 
 
 
425 aa  62.4  0.00000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.255639  normal 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  26.73 
 
 
457 aa  62  0.00000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_010002  Daci_5306  extracellular solute-binding protein  25 
 
 
431 aa  62  0.00000002  Delftia acidovorans SPH-1  Bacteria  normal  normal  0.457023 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  27.59 
 
 
423 aa  62  0.00000002  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  26.98 
 
 
420 aa  62  0.00000002  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  25.81 
 
 
422 aa  61.6  0.00000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_008043  TM1040_3216  extracellular solute-binding protein  27.54 
 
 
425 aa  60.8  0.00000005  Ruegeria sp. TM1040  Bacteria  normal  normal  0.949389 
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  28.72 
 
 
406 aa  60.5  0.00000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_009620  Smed_4644  extracellular solute-binding protein  32.67 
 
 
409 aa  60.5  0.00000006  Sinorhizobium medicae WSM419  Bacteria  normal  0.0265502  normal  0.0904039 
 
 
-
 
NC_011988  Avi_5331  ABC transporter substrate binding protein (sugar)  26.25 
 
 
431 aa  60.5  0.00000006  Agrobacterium vitis S4  Bacteria  normal  0.998389  n/a   
 
 
-
 
NC_012858  Rleg_6631  extracellular solute-binding protein family 1  38 
 
 
410 aa  59.7  0.0000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.325237 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  27.92 
 
 
410 aa  59.7  0.0000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_011884  Cyan7425_4083  extracellular solute-binding protein family 1  26.2 
 
 
417 aa  58.5  0.0000002  Cyanothece sp. PCC 7425  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_4688  extracellular solute-binding protein family 1  25.92 
 
 
418 aa  59.3  0.0000002  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.733472 
 
 
-
 
NC_013205  Aaci_2873  extracellular solute-binding protein family 1  25.6 
 
 
425 aa  58.9  0.0000002  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  28.35 
 
 
410 aa  58.9  0.0000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_010816  BLD_0921  MalE-type ABC sugar transport system periplasmic component  27.52 
 
 
458 aa  58.5  0.0000002  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  25 
 
 
419 aa  58.2  0.0000004  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
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