| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rleg_4863 |
|---|
| Symbol | |
|---|
| ID | 8007251 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_012848 |
|---|
| Strand | + |
|---|
| Start bp | 243972 |
|---|
| End bp | 245450 |
|---|
| Gene Length | 1479 bp |
|---|
| Protein Length | 492 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 644821793 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_002973053 |
|---|
| Protein GI | 241113218 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 0.426159 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACGAGGA TTTCACTCGG CGGTGCCGCC GCGCGCGCAA CTGTATCCAC TGCTTTGATG
CTATCGTTGA TGTCCGCGTC TGCACTGGGC GCGCCGGTCG ACCTGAGCAA GTGGTCGCCG
GAATATGTGC GCTCCATTGC CGGCACACAG GACTTTGACA CGGCGGGCGA TTGCGCCAAG
GTCACCCCCC TCGACTACAA GGGGCGACTG ACTTTCTGGT ATCAGGGCGT GTTCGAGGGT
GACCCCGACC TCCTGCGCCA GTATTACAAG GAGTTCTTCG AGACCTTCCG CAAGACCTAT
CCAAACATCC AGCTTGAGGA ACAAGCCCTC ACCTATAACG ACCTGCTGGA CAAGTTCCGC
ACCGCGCTCC TTGGCAATGC AGCGCCAATG GCGGTGCGTC TGCAAATCCT GGGCGGCACC
GAGTTCGCCT CGAAGGGCTA TCTGGAACCC CTCAAACCAG AGGACGTAGG GTATTCGACC
GACGACTTCT GGCCCGGTGC AATGAAGGCC GTAACCTGGG AGGGGGTGAC CTACGGCATC
CCGACCAACA ACGAGACGAT GGCGTTCATC TGGAACGCCG ACGTCTTCAA GCGTGCAGGC
CTCGATCCGG AAAAGGCTCC GGCAACCTGG GACGACGTCG TCAAATATTC CAAGCAGATC
CACGACAAGC TCGGCATTGC CGGTTACGGC CTCGTGGCGC GCAAGAACGC CGGCAATACG
CCGTATCGCT TCATGCCGCA GCTGTGGGCC TATGGCGGCG GCGTTTTCGA CGAAGCCACC
GCCAATCCGA CCTACAAGCA GGTCCAGCTC GACAGCCCGC AGAGCAAAGC GGCATTGCAA
GCCTCCTACG ATATGTATGT CCGCGACAAA TCGGTTCCGG TTTCGGCGCT CACCAACCAG
CAGGCGGATA ACCAGCCCCT CTTCCTCGCT GGCCAGCTCG GCATGATGGT CTCGCACCCC
TCCGACTACA ACGTCATGCT CGACCTGCAG AAAAAGACGA CGGGCGGCGA CAAGGACAAA
GCGCAGACCG TCATCGACAA TATGCGCTAC GGCCTGATTC CGACTGGCCC CGACGGCAAG
CGTGCCGTCG TGTTTGGCGG CTCGAACATT CACATCCTGA AGCCCGAATA TGTCGAGGGC
GGCAAGGTCG ACGAGCCGGC TGCAAAGGCT ATCAGCTGCA TGTGGGCAAG CCCCGAATGG
TCGCTGAAAA TGGCCTATGC CGGCTCGAAC CCGGGAAACC TTAACGGCTT CAAGACCAAA
TGGATGAAGG AACGCCTGGA CAGTATAAAG TTCCTTGATG TCACGACTTC GATGCTGCCA
TACGGCATCC CGTTTCCGGC GCTGCCCCAG TCCCCCGAGA TCATGAACAT CATCGTCCCG
GACATGCTGC AGAATGCCCT CACCGGAGCC ATGACTGTCG ACCAAGCAGC GGACGACGCA
GCCAAGAAGG TCAAAGACCT AACGGATGGC GGACTCTAG
|
|---|
| Protein sequence | MTRISLGGAA ARATVSTALM LSLMSASALG APVDLSKWSP EYVRSIAGTQ DFDTAGDCAK
VTPLDYKGRL TFWYQGVFEG DPDLLRQYYK EFFETFRKTY PNIQLEEQAL TYNDLLDKFR
TALLGNAAPM AVRLQILGGT EFASKGYLEP LKPEDVGYST DDFWPGAMKA VTWEGVTYGI
PTNNETMAFI WNADVFKRAG LDPEKAPATW DDVVKYSKQI HDKLGIAGYG LVARKNAGNT
PYRFMPQLWA YGGGVFDEAT ANPTYKQVQL DSPQSKAALQ ASYDMYVRDK SVPVSALTNQ
QADNQPLFLA GQLGMMVSHP SDYNVMLDLQ KKTTGGDKDK AQTVIDNMRY GLIPTGPDGK
RAVVFGGSNI HILKPEYVEG GKVDEPAAKA ISCMWASPEW SLKMAYAGSN PGNLNGFKTK
WMKERLDSIK FLDVTTSMLP YGIPFPALPQ SPEIMNIIVP DMLQNALTGA MTVDQAADDA
AKKVKDLTDG GL
|
|---|
| |