| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Cphy_0592 |
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| Symbol | |
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| ID | 5743506 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium phytofermentans ISDg |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010001 |
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| Strand | + |
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| Start bp | 769518 |
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| End bp | 770888 |
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| Gene Length | 1371 bp |
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| Protein Length | 456 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 641291704 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001557718 |
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| Protein GI | 160878750 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000165278 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAA CTAAGAAGAT TCTTGCCGTA ATGCTCACAA CTATTTTGGC AGTTAGCTTA
GTAGCTTGTG GAAAGGATGC AAAAGACACG GGTAATGGCA AATCCTCAAA GGACGGAAAA
GTTAAGATTA CATATTCTAT GTGGGGGAGT GCAGATGAGG GAGCTGTAAC GCAGAAACTA
GCAGATAAGT TTAATGCCTC ACAGGATCGA ATCGAGGTCG ATGTTCTCGC AATCCCATGG
GAAAACTACA TGACAAAGTT AAATACTATG GCAACTGCAA AAGAATTACC AGATACCGGT
ATTATGTCGG AAGCAGGGGT TCTTCAATGG GCAGAACAGG GAATGCTTGC TGATATTAGT
ACGATGTATG GAAAAAACGA TAGCAAGCCG CTAGATAGCC TTGCTTTCCG CTATCAAGGA
AAAACCGTTG CTTACTCTGC AGCAAACGAA GTTCTTTTGC TTTATTATAA CAAAGACATG
TTTGATAAAG CAGGTGCCAC TTATCCTCCA GCGTCTGTTG ATAATGCTTG GACCTGGGAA
GAATTTGTTA GCACTGCAAA GAAACTTACC TTAGATAAAA ATGGAAAGCA TCCTGATGAA
AAGGGATTTG ATGAGCAAAA TATAGTTCAA TACGGCTGTC TAGTAGAGAA CTTAGCATGG
CAACTTGAGC TATGGCCAAT GAGCAATGGA GCTGGATACT ATTCAAGCGA TGGATCAGAA
GTAACAATTG ATAATCAAGC TAGTATTGAA GCTATCCAAA AAGTTGCGGA TTTGTACTTA
GTAGACCATG TTGCACCTCT CTCGACAGGA GCAACAGATG ATAGTATACA GCGTTCCATT
ATTTCCGGTA CTTGTGCTAT GGGAACAGGA GGTGCTTGGA ATGTGGGAAC CTGTCTTGCA
TCAGCACGTG AAGAGGGATT AAATTATGGT GTTGCAGTAT TACCTTACAT GAAAGAAAAG
CTAACCTTAT GTACCGGTGG ACCAAATGTC GTATTTTCGC AGACAAAACA TCCAGAAGAA
GCAATGGAGT GGTTAAAGTG GTATTATCAA GAAGAAAATA GCTGGTCCTT GATTGAAACT
GGTATCTGGA TGCCAATCCT CCAAAAATGG TATACGGATG AAACGATGAC TCATAAATGG
GTAGACAATA AGAACTTCCC TCCATATGAG GAATATAAGA GTGCAGTTGT TGATTATGCT
ATGAAGAATT CTAAGTCTGC GTCCTGGTAT TATGTAAATA ATACAGTTGA TTTTAATAAC
TTAGTCACCT CAATTTTAGG TGAAGTTTGG ACTGGTAAAG TCACTGCACA GGAAGCAATT
ACAAAAAATA TGGAAGCCTT AAAAACAGCT TATAAGGGAA CGGCAAAGTA A
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| Protein sequence | MKVTKKILAV MLTTILAVSL VACGKDAKDT GNGKSSKDGK VKITYSMWGS ADEGAVTQKL
ADKFNASQDR IEVDVLAIPW ENYMTKLNTM ATAKELPDTG IMSEAGVLQW AEQGMLADIS
TMYGKNDSKP LDSLAFRYQG KTVAYSAANE VLLLYYNKDM FDKAGATYPP ASVDNAWTWE
EFVSTAKKLT LDKNGKHPDE KGFDEQNIVQ YGCLVENLAW QLELWPMSNG AGYYSSDGSE
VTIDNQASIE AIQKVADLYL VDHVAPLSTG ATDDSIQRSI ISGTCAMGTG GAWNVGTCLA
SAREEGLNYG VAVLPYMKEK LTLCTGGPNV VFSQTKHPEE AMEWLKWYYQ EENSWSLIET
GIWMPILQKW YTDETMTHKW VDNKNFPPYE EYKSAVVDYA MKNSKSASWY YVNNTVDFNN
LVTSILGEVW TGKVTAQEAI TKNMEALKTA YKGTAK
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