| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Jann_3553 |
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| Symbol | |
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| ID | 3936028 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Jannaschia sp. CCS1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007802 |
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| Strand | + |
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| Start bp | 3616521 |
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| End bp | 3617780 |
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| Gene Length | 1260 bp |
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| Protein Length | 419 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 637905928 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_511495 |
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| Protein GI | 89056044 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 26 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAACGTA TTCTTATCAG TGCCAGCACC ATCGCCATGA TGGTCGCCGG CGCGGCGCAA
GCCGACACGA CATTGAGGTT GGTTGAAGTG ATCACCAGCC CCGAGCGGAC GGCCGTTCTG
GAACAGATCG TGGCCGATTT TGAAGCCGCC AATGAGGGTG TGACGGTCGA GATTACCAGC
CTGCCCTGGG GCCAGGCGTT TGAGACGCTG GCGACCATGG TCGCGGGCGG CGACATCCCC
GATGTGGTGG AGATGCCCGA TACTTGGGCC GCGCTTTATG CGGGCTCGGA TCGTCTGGTG
GACCTGTCCG ACCATGTGGC CGGTTGGGAA GATGGCGCGA CACTGACCCA GCGGACCGTG
GACATGGGTA GCCAATCAGG CGCCTTCAAC ATGATCCCTT ACGGCTTCTA CCTGCGGGCG
ATGTTCTACA ACCGGGCCCT GCTGGAAGAG GCGGGCGTGG CCGAGCCGCC GCGCACGATG
GCGGACTTCG CGGCTGCCGC CGCAGCTGTG TCCGAATTGG ACGGTCGGTC CGGCTACTGC
CTGCGCGGCG GGCCGGGTGG CACCAACGGC TGGATCATGA TGGCAGCCGC GATGAACGGC
ACCAACGAGT TCTTCACCGA AGATGGCCAG TCGCGGATCA ACGAGCCGGG CTCTGTCGAA
GGGATCCAGT TCCTGCTGGA CATGTATCAG AACGGGAATG CGCCGCGTGA CAGCGTGAAC
TGGGGCTTTA ACGAGATCGT GGCGGGCTTC TATTCCGGCC AATGCGCGTT CCTTGACCAG
GACCCCGACG CGCTGATCGC GATTGCCGAG CGGATGGATG CGGACGACTT CGCCGTGATC
CCGATGCCCG TCGGCCCATC GGGTGAGGCA TTCCCGACCA TCGGATTTGC GGGTTGGTCG
ATCTTCAACA CGACCGAGCA CGAGGAAGAG GCCTTTGATC TGGTCGCGGC CCTGTCGTCG
CCCGAGGCAA ATTCCACCTG GGCGCAGCGG GTTGGCGTGA TCCCGATCCA CCAGGGTGCT
GATCAGGACC CTTATTTCCA GACCGACCAA TTCGCGGGCT GGTTTGAGAC CCTGAATGGC
GAGGAATATG TGCCCACGAT CATGCCCACC TACCTTGAGG AATGGGGCTA TTTCGCCAGC
ACAATCGTGG TTGAAACCAG CCAGGAAGCG CTTCTGGGAC AGATCACCGC GCAGGAATTG
GCCGACCAAT GGGCCGAGTA CCTGAACGAG GCGCAAGCCA ACTGGCAGGC CGCCCAGTGA
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| Protein sequence | MKRILISAST IAMMVAGAAQ ADTTLRLVEV ITSPERTAVL EQIVADFEAA NEGVTVEITS
LPWGQAFETL ATMVAGGDIP DVVEMPDTWA ALYAGSDRLV DLSDHVAGWE DGATLTQRTV
DMGSQSGAFN MIPYGFYLRA MFYNRALLEE AGVAEPPRTM ADFAAAAAAV SELDGRSGYC
LRGGPGGTNG WIMMAAAMNG TNEFFTEDGQ SRINEPGSVE GIQFLLDMYQ NGNAPRDSVN
WGFNEIVAGF YSGQCAFLDQ DPDALIAIAE RMDADDFAVI PMPVGPSGEA FPTIGFAGWS
IFNTTEHEEE AFDLVAALSS PEANSTWAQR VGVIPIHQGA DQDPYFQTDQ FAGWFETLNG
EEYVPTIMPT YLEEWGYFAS TIVVETSQEA LLGQITAQEL ADQWAEYLNE AQANWQAAQ
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