| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tmel_1820 |
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| Symbol | |
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| ID | 5297466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Thermosipho melanesiensis BI429 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009616 |
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| Strand | - |
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| Start bp | 1804569 |
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| End bp | 1805804 |
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| Gene Length | 1236 bp |
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| Protein Length | 411 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640770088 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001307040 |
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| Protein GI | 150021686 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.148067 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAAGAT TAGTTGTTTT AGGCATTTTA TTGTCACTTT TTGTATTATC GCTTGGAATT
ACTACAATTA CTATGACATC CGGTGGTGTG GGAAAAGAAC TTGAAGTTTT ATACGCACAG
CTAAAAGAGT TTATGAAGGA AAATCCTGAT ATAGTAGTTA CTGTTATTCC AATGCCAGAT
TCTTCTACAG AAAGACATGA TTTGTATGTT ACGTATTTGG CTGCAGGAGA AAGTGATCCT
GATGTGTTAA TGTTAGACGT AATTTGGCCT CCAGAATTTG CTCCATTTTT AGAGGATTTA
ACAGATGATT ATCAATACTT TGAACTTGAT AAGTTTTTAC CAGGTACAGT TAAATCTGTT
ACAGTAATGG GAAGAATTGT TGCAGTTCCA TGGTTTACTG ATGCAGGCCT TTTGTATTAC
AGAAAAGATT TACTTGAAAA ATATGGATAC AAAAAACCAC CTGAAACATG GGATGAATTG
GTTGAGATGG CAAAAAAGAT TTCACAAGCC GAAGGTATAG AAGGTTTTGT TTGGCAAGGT
GCAAGATACG AAGGATTAGT ATGTGATTTT ATGGAATATT TATGGTCTTT TGGAACAGAT
GTTTTAAATG AAAATGGAAA TGTTGTAGTC AATAATCCTA AAGCGGTAGA AGCATTGCAA
TTTATGGTAG ATTTAATTTA CAAAAATAGA ATTTCTCCTG AAGGTGTAAC AACGTACATG
GAAGAAGATG CAAGAAGAAT TTTCCAAAGT GGTAATGCAG TATTTATGAG AAATTGGCCA
TATGCATGGT CGCTTGCAAA TTCCGATGAT TCACCTATAA AAGGAAAAGT GGGTATTGCA
CCACTCCCAA AAGGTCCTGG TGGTAAACAC GCAGCAACAT TGGGTGGATG GAATTTAGGA
ATTAATGCAA ATTCTTCACC AAAAGAAAAA GAAGCTGCAA AGAAATTAAT TAAGTTCCTT
ACAAGTCACA ATCAACAATT GTATAAGGCA ATTAATGCAG GGCAAAATCC AACAAGAATG
GCCGTATATG AAGAGCCAAA ATTGAAGGAA GTTAATCCAT TTATGGTCGA GTTGTTTGAT
GTATTCATTA ATGCTCTTCC AAGACCAAGG GCAGTAAATT ACGCGGAAAT TTCTGATGCA
ATTCAAAGAC ATATTCACGC GGCCTTGACA AGACAGGTTA CACCTGAACA AGCTATAAAA
GATTTAGAGA AGGAGTTAAA AATGCTTATA AAATAA
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| Protein sequence | MKRLVVLGIL LSLFVLSLGI TTITMTSGGV GKELEVLYAQ LKEFMKENPD IVVTVIPMPD
SSTERHDLYV TYLAAGESDP DVLMLDVIWP PEFAPFLEDL TDDYQYFELD KFLPGTVKSV
TVMGRIVAVP WFTDAGLLYY RKDLLEKYGY KKPPETWDEL VEMAKKISQA EGIEGFVWQG
ARYEGLVCDF MEYLWSFGTD VLNENGNVVV NNPKAVEALQ FMVDLIYKNR ISPEGVTTYM
EEDARRIFQS GNAVFMRNWP YAWSLANSDD SPIKGKVGIA PLPKGPGGKH AATLGGWNLG
INANSSPKEK EAAKKLIKFL TSHNQQLYKA INAGQNPTRM AVYEEPKLKE VNPFMVELFD
VFINALPRPR AVNYAEISDA IQRHIHAALT RQVTPEQAIK DLEKELKMLI K
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