| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dgeo_3106 |
|---|
| Symbol | |
|---|
| ID | 5687581 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Deinococcus geothermalis DSM 11300 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009939 |
|---|
| Strand | - |
|---|
| Start bp | 196050 |
|---|
| End bp | 197276 |
|---|
| Gene Length | 1227 bp |
|---|
| Protein Length | 408 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 641262569 |
|---|
| Product | ABC transporter, substrate binding periplasmic component |
|---|
| Protein accession | YP_001527843 |
|---|
| Protein GI | 158421616 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | n/a |
|---|
| Plasmid unclonability p-value | n/a |
|---|
| Plasmid hitchhiking | n/a |
|---|
| Plasmid clonability | n/a |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCGTCACC GTACCCTGTC CGTCGCCCTG ACCTTGTTCC TGGTCCTTGG CAGCAGTGCT
GAGGCCGCTG ACCTGCGCTT CAGCACTTGG GCCGGCGGCG AGGGTCTGGC CCTCTTGCAG
CAACTTGCCA AGGAGTACAC TGCCAAGACG GGTACGAACG TCAAAGTCGA GGTCACGCCC
TTCGCGGACT ACAGCCGCAA GCTCTCCGTG CAGATTGCCT CGGGTGACGC CCCGGACATC
GGCTGGGTGG CTGAGCGGGA CGTGCCGACC TTCCTCGCCT CGAACAATCT CGCCAACCTC
AGCGCTTTAA GCAAGGACGC CTCGTTCAAT CTGAACGACT TCCCAACCTC CTCGTTGGCC
CTCTGGAAGC AGGGCGGCAA TCTATATGGC ATTCCCTTTT CAAATTCACC GCTGGTGCTC
TTTTACAACA AGGATCTCTT TAAGCAAGCT GGGGTTGCAG ACCCAATGAC CCAGTACGCC
AAGGGGCAGT GGAGCTACAA CGACTTCCAA AAGAGTGCGC TCGCCATCAA ACAGAAAACC
GGCAGCTACG GTGCACGCGT GATGCGCCTC GACCCCAAGG CGTGGGCGGG TGGCTTGCTG
GCCGTTCTGT GGTCCCAGGG GGGCGGGGTA TACGACAAAA ATATGAAGTG TAACCTCAAC
GCTCCCGGGA GCCTGCAAGC CTTCAGCCTC ATGCAGAACA TGATGTTCAA AGACCAGTCG
ATGCCGCGCC CCGGCGACCA GACCAGCTTC GACGGCGGAA GGCTAGGCAT GTACTTCGAC
AACATCAGCT ACGCCGGGCA ACTTAAGGAC GCCAAGTTCA AGTGGGGCAT CGCGCCGCTA
CCGAAGGGGA GCGCGGGCCG GATCACCCAG CTCGGGCAGG CTGGATACGC TGTCTTCAGT
AAGGGGCGGA ATCAGGCGGA GGCCGTCAAT TTTCTGAAGT TCATCGCCTC TAAGGAGAAT
ATGGCCCGCA CCGCCAAGTT CTTCCCGCCG CCCCGCCAGT CAGTTCTCAG GAGCAGCGCC
TACTTGAACG CCAACCCTGC AATTCCTGCC AGCGCCCTCA AGACCGCCCT TATCAGCCAG
CTCGGCAGCG CCCGTGTGCT GCAAACCGAC ACCCACTGGC TCAAGGCGAA CGACGCGATC
ACGGGCAGCC TCGACCAGGT ATTCCAGCCT GGCACCAACA CGAAAGCCAT CCTGGACCGT
ACCTGCCAGA CGGTGGACGG CCTGTAG
|
|---|
| Protein sequence | MRHRTLSVAL TLFLVLGSSA EAADLRFSTW AGGEGLALLQ QLAKEYTAKT GTNVKVEVTP
FADYSRKLSV QIASGDAPDI GWVAERDVPT FLASNNLANL SALSKDASFN LNDFPTSSLA
LWKQGGNLYG IPFSNSPLVL FYNKDLFKQA GVADPMTQYA KGQWSYNDFQ KSALAIKQKT
GSYGARVMRL DPKAWAGGLL AVLWSQGGGV YDKNMKCNLN APGSLQAFSL MQNMMFKDQS
MPRPGDQTSF DGGRLGMYFD NISYAGQLKD AKFKWGIAPL PKGSAGRITQ LGQAGYAVFS
KGRNQAEAVN FLKFIASKEN MARTAKFFPP PRQSVLRSSA YLNANPAIPA SALKTALISQ
LGSARVLQTD THWLKANDAI TGSLDQVFQP GTNTKAILDR TCQTVDGL
|
|---|
| |