Gene TBFG_12078 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagTBFG_12078 
Symbol 
ID5222753 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMycobacterium tuberculosis F11 
KingdomBacteria 
Replicon accessionNC_009565 
Strand
Start bp2301139 
End bp2302458 
Gene Length1320 bp 
Protein Length439 aa 
Translation table11 
GC content64% 
IMG OID640606833 
Productsugar-binding lipoprotein 
Protein accessionYP_001288011 
Protein GI148823257 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1653] ABC-type sugar transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones403 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones217 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTCAATA AGCCGTTCGA GCGGCGCAGT CTGTTACGGG GTGCGGGCGC GCTTACTGCG 
GCCTCGCTGG CTCCCTGGGC CGCTGGGTGT GCTGCCGATG ACGATGACGC GTTGACTTTC
TTTTTTGCAG CCAATCCGGA CGAGCTCCGT CCCCGGATGC GCGTCGTCAA CGAATTCCAG
CGGCGCTATC CCGATATCAA GGTACGGGCC CTGTTGTCCG GACCCGGCGT CATGCAGCAG
CTCGCAACGT TTTGCGCGGG TGGCAAGTGT CCGGATGTGC TGATGGCATG GGAACTGACC
TATGCCGAAC TGGCCGACCG GGGGGTGTTG CTTGACCTGA ACACGCTATT GGCGCGCGAC
CAGGCTTTCG CCGCGGAGCT GAAATCGGAC AGCATCGGGG CCCTGTATGA GACTTTCACG
TTCAACGGAG GCCAGTACGC CTTTCCGGAG CAATGGTCCG GCAACTTCTT GTTCTACAAC
AAACAGCTAT TCGACGACGC CGGCGTGCCA CCGCCGCCCG GTAGCTGGGA ACGGCCATGG
AGCTTCGCCG AATTCCTGGA TGCCGCCCAG GCGCTTACCA AGCAGGGCCG GTCGGGACGG
GACAGGCAAT GGGGCTTCGT CAACGCGTGG GTCTCGTTCT ACGCTGCCGG GTTGTTCGCC
ATGAATAACG GTGTACCGTG GTCGGTTCCG CGGATGAATC CCACCCACCT CAATTTCGAC
CACGACGGGT TCCTCGAAGC GGTGCAGTTC TACGCCGACC TGACCAACAA GCACAAGGTG
GCCCCCAGCG CTGCTGAGCA GCAGTCGATG TCGACGGCGG ACCTGTTTTC TGTGGGCAAG
GCCGGGATCG CGTTGGCCGG GCACTGGCGA TATCAGACGT TCGACCGTGC CGACGGTCTG
GACTTCGACG TCGCCCCACT GCCCATCGGT CCGCGCGGAC GAGCCGCCTG TTCAGATATC
GGTGTCACCG GGCTGGCCAT TGCGGCGACC AGTCGACGCA AGGACCAGGC GTGGGAATTC
GTAAAGTTCG CGACCGGCCC GGTGGGGCAG GCATTGATCG GCGAATCCCG CCTGTTCGTG
CCGGTGCTGA GATCGGCGAT CAACTCGCAC GGATTCGCCA ACGCCCACCG CAGGGTAGGC
AATCTTGCCG TGCTCAGCGA GGGGCCGGCC TATTCGGAAG GCTTGCCGGT GACCCCGGCC
TGGGAGAAGA TCGCCGCCCT GATGGACCGC TACTTCGGAC CCGTGCTGCG TGGATCCCGG
CCGGCGACCT CGCTGACCGG GCTATCACAG GCCGTCGATG AAGTGCTGCG CAATCCATGA
 
Protein sequence
MVNKPFERRS LLRGAGALTA ASLAPWAAGC AADDDDALTF FFAANPDELR PRMRVVNEFQ 
RRYPDIKVRA LLSGPGVMQQ LATFCAGGKC PDVLMAWELT YAELADRGVL LDLNTLLARD
QAFAAELKSD SIGALYETFT FNGGQYAFPE QWSGNFLFYN KQLFDDAGVP PPPGSWERPW
SFAEFLDAAQ ALTKQGRSGR DRQWGFVNAW VSFYAAGLFA MNNGVPWSVP RMNPTHLNFD
HDGFLEAVQF YADLTNKHKV APSAAEQQSM STADLFSVGK AGIALAGHWR YQTFDRADGL
DFDVAPLPIG PRGRAACSDI GVTGLAIAAT SRRKDQAWEF VKFATGPVGQ ALIGESRLFV
PVLRSAINSH GFANAHRRVG NLAVLSEGPA YSEGLPVTPA WEKIAALMDR YFGPVLRGSR
PATSLTGLSQ AVDEVLRNP