| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Htur_4488 |
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| Symbol | |
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| ID | 8745117 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Haloterrigena turkmenica DSM 5511 |
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| Kingdom | Archaea |
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| Replicon accession | NC_013745 |
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| Strand | + |
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| Start bp | 82550 |
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| End bp | 83854 |
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| Gene Length | 1305 bp |
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| Protein Length | 434 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 646515025 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003405972 |
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| Protein GI | 284172590 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.395657 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACGAACA ACCGAATATC GTCGAAATCA CGTCGTAGAT TCATCAAGAC TGCCGGTGTC
GCGGGCACCG CTTCACTCGC CGGCTGTATC GGTGGCGGCT CTAGCGGCTA CACTATTGCG
TTCTGGGAGC TGTTCAGCGG TGGCGAGGGA CCCGTGATGG AGGACATCGT TCAAAAGTTC
AACGAGGAAC AGCCACTCGA CGTGGACGAG GAGGTGACGA TCGACCGTCA GCGAACGCCG
TGGGACCAGT ACTACAATAA CCTGTACACT ACGCTCGCGG GCGGTAGCGG ACCCGATCTG
GCAGTTATGC ATGCAGCATA TCTGCGTGCG TGGGACGATA CGATCGTGCC GATGGACAAC
TATATCGATA CCGGGGAAAT CGAAGGCGAT TACCTCGATA ATCACTGGGA CCTCGTGTCG
GTCGAAGGAG AGACGCGAGC GCTTCCGATG GACCTGCACC CGGTTGGGAT GTACTACAAT
AAGGCGATCT TCGAGGAAGC GGGCCTCGAC CCCGAGTCCC CGCCGACGAA CTGGGAGGAG
TTCCAGGCCG CGGGGAACGC GATCGCCGAA GAAACCGATA AATGGGCGTT CAGCCAGACC
CCCTACAACG ACGGGTTCGG CTCGTGGCGA ACGTGGAGTA CGCTCGTCAA GCAACAGGGC
GGAGAGCTCT TCGACGACGA CTGGAATCCG ACGTTCGACG GTCAGGCGGG CCAGGACACC
TCCGAACTGT TCTGGAATAT GACCGGCGAT ATGGAGTGGT CCCCCCAGAC AACCGAAGCG
GACTGGGGCG CGAACGCCTT CGAGAACGGA AACCTGGGCA TGACGATGAA CGGGACGTGG
TACGTGGCCA CCCTAGAGGA GTCGGACATC GACTGGGGAT TCTTCAAGCC GACCATCGCT
CCCAACAGGA CCCAGGATCG GGTCTGGACG GACGGTCACA CGATCGTGTT ACCCCGGAGC
CAGGACCGCG GCGACGACAA ATCCGAAATC GCGGCGAAGG TCGCCCACTG GTTGACGACC
GAGAACCCCG AGTGGGGTGC GCGAGCGGGT CACCTTCCCG CCGCCGCGGA CATCAGGGAG
TCCGACGTGT TCCAAAACGC GTCGTTCTAC GACAAAACCC TCAGCAAATA CCTCGAGATG
GCCGAAGAGG ACATGTACTT CTACCATCCG AAGGTGCCGA ACGGCGACCC CAACTCGGAG
AGTTGGTACC AGTGGCTGCT CGACATGTGG GGCCACAACT ACGAGAGTCC CCAAGAGGCA
CTCAACGACG GTGTCTCGAT GATCAGTAAC GGCCTCGAGG AGTAA
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| Protein sequence | MTNNRISSKS RRRFIKTAGV AGTASLAGCI GGGSSGYTIA FWELFSGGEG PVMEDIVQKF
NEEQPLDVDE EVTIDRQRTP WDQYYNNLYT TLAGGSGPDL AVMHAAYLRA WDDTIVPMDN
YIDTGEIEGD YLDNHWDLVS VEGETRALPM DLHPVGMYYN KAIFEEAGLD PESPPTNWEE
FQAAGNAIAE ETDKWAFSQT PYNDGFGSWR TWSTLVKQQG GELFDDDWNP TFDGQAGQDT
SELFWNMTGD MEWSPQTTEA DWGANAFENG NLGMTMNGTW YVATLEESDI DWGFFKPTIA
PNRTQDRVWT DGHTIVLPRS QDRGDDKSEI AAKVAHWLTT ENPEWGARAG HLPAAADIRE
SDVFQNASFY DKTLSKYLEM AEEDMYFYHP KVPNGDPNSE SWYQWLLDMW GHNYESPQEA
LNDGVSMISN GLEE
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