| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Smed_4557 |
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| Symbol | |
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| ID | 5318419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sinorhizobium medicae WSM419 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009620 |
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| Strand | - |
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| Start bp | 1043256 |
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| End bp | 1044494 |
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| Gene Length | 1239 bp |
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| Protein Length | 412 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640776358 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001313290 |
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| Protein GI | 150376694 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.302395 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGAAAT CCATCCGCAA CGCTTTGATC GGCGCGACCC TTGTCGGCGC CGGCTTCACC
GGCCATGCCC AGGCCGAAAC GACTCTGAAC GCGCTTTTCA TGGCGCAGGC CGCCTATAGC
GAGGCAGACG TCCGCGCCAT GACGGATGCC TTCGCCAAGG CCAATCCCGA CATCAAGGTC
AATCTCGAAT TCGTTCCCTA TGAGGGACTG CACGACAAGA CGGTGCTCGC GCAGGGTTCC
GGCGGCGGCT ATGACGTCGT CCTTTTCGAC GTCATCTGGC CGGCGGAATA TGCAGCCAAC
AATGTTCTCC TCGACGTGAC GGACCGCATC ACGGACGAGA TCAATCAAGG CGTCCTGCCC
GGCGCCTGGA CGACGGTGGA ATATGACGGC AAACGTTACG GCATGCCGTG GATCCTCGAC
ACGAAGTACC TGTTCTACAA CAAGGAAATC CTTGAGAAAG CCGGCATCAA GGAACCGCCG
AAAACCTGGG ACGAGCTTGC GGAACAAGCC AAAGCCATCA AGGACAAGGG ACTGCTCGAA
AACCCGATCG CCTGGAGCTG GTCTCAAGCG GAAGCGGCCA TCTGCGACTA CACCACTCTG
GTCAGTGCCT ATGGCGGAAA ATTCCTCGAT AGCGGCAAGC CGGCCTTCGC CAGCGGCGGC
GGGCTCGATG CGCTGAACTA CATGGTGACG AGCTACACCT CCGGGCTCAC CAACCCGAAT
TCCAAGGAGT TCCTCGAGGA GGATGTCCGC AAGGTCTTCC AGAACGGCGA GGCCGCCTTC
GCGCTCAACT GGACGTACAT GTACAACCTC GCCAACGATC CCAAGGAGAG CAAGGTAGCC
GGCAAGGTCG GCGTCGTTCC GGCTCCCGGC GTTGAAGGCA AAAGCGAGGT TTCGGCCGTC
AACGGCTCCA TGGGCCTCGG CATCACGACG ACCAGCAAGC ACCCCGAAGA AGCATGGAAA
TATATCGTCC ACATGACCTC GCAGGAGACG CAGAACGCCT ATGCCAAGCT GAGCCTCCCG
ATCTGGGCAT CTTCCTATGA AGACCCCGAT GTGACCAAGG GCCAGGAGGA ACTCATCGCT
GCGGCGAAGC GCGGGCTGGC CGCCATGTAT CCACGCCCAA CGACGCCGAA ATACCAGGAG
CTTTCGGCTG CCCTGCAGCA GGCCATCCAG GAGGCGCTGC TCGGCCAAGC CTCTGCGGAA
GACGCGCTGA AGAGCGCCGC TGAGAACAGT GGCTTGTGA
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| Protein sequence | MSKSIRNALI GATLVGAGFT GHAQAETTLN ALFMAQAAYS EADVRAMTDA FAKANPDIKV
NLEFVPYEGL HDKTVLAQGS GGGYDVVLFD VIWPAEYAAN NVLLDVTDRI TDEINQGVLP
GAWTTVEYDG KRYGMPWILD TKYLFYNKEI LEKAGIKEPP KTWDELAEQA KAIKDKGLLE
NPIAWSWSQA EAAICDYTTL VSAYGGKFLD SGKPAFASGG GLDALNYMVT SYTSGLTNPN
SKEFLEEDVR KVFQNGEAAF ALNWTYMYNL ANDPKESKVA GKVGVVPAPG VEGKSEVSAV
NGSMGLGITT TSKHPEEAWK YIVHMTSQET QNAYAKLSLP IWASSYEDPD VTKGQEELIA
AAKRGLAAMY PRPTTPKYQE LSAALQQAIQ EALLGQASAE DALKSAAENS GL
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