More than 300 homologs were found in PanDaTox collection
for query gene Ndas_0659 on replicon NC_014210
Organism: Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  100 
 
 
425 aa  842    Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  36.56 
 
 
443 aa  246  6e-64  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013595  Sros_2194  ABC-type sugar transport system periplasmic component-like protein  34.6 
 
 
443 aa  204  3e-51  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25450  ABC-type sugar transport system, periplasmic component  31.08 
 
 
430 aa  171  3e-41  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0772443  n/a   
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  32.91 
 
 
427 aa  160  5e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  29.31 
 
 
427 aa  157  2e-37  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013093  Amir_0446  extracellular solute-binding protein family 1  29.62 
 
 
424 aa  143  5e-33  Actinosynnema mirum DSM 43827  Bacteria  normal  0.900099  n/a   
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  29.93 
 
 
422 aa  143  6e-33  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  29.95 
 
 
428 aa  141  1.9999999999999998e-32  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  29.28 
 
 
420 aa  139  7e-32  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  28.41 
 
 
399 aa  138  1e-31  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  29.13 
 
 
426 aa  137  5e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  28.71 
 
 
424 aa  135  1.9999999999999998e-30  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_008578  Acel_0552  extracellular solute-binding protein  30.27 
 
 
445 aa  130  4.0000000000000003e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.764632 
 
 
-
 
NC_013174  Jden_0234  extracellular solute-binding protein family 1  29.35 
 
 
412 aa  130  6e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  0.497123  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  26.41 
 
 
402 aa  125  2e-27  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  26.3 
 
 
459 aa  124  3e-27  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  25.18 
 
 
440 aa  123  5e-27  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  25.86 
 
 
423 aa  122  9.999999999999999e-27  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1045  extracellular solute-binding protein family 1  28.47 
 
 
488 aa  122  9.999999999999999e-27  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0733801  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  28.13 
 
 
406 aa  122  1.9999999999999998e-26  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  26.46 
 
 
426 aa  119  7e-26  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  26.13 
 
 
434 aa  118  1.9999999999999998e-25  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  27.23 
 
 
427 aa  118  1.9999999999999998e-25  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  25.25 
 
 
424 aa  117  3e-25  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  28.53 
 
 
459 aa  117  3.9999999999999997e-25  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_009664  Krad_3730  extracellular solute-binding protein family 1  26.38 
 
 
435 aa  117  3.9999999999999997e-25  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.163607  normal  0.040318 
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  29.35 
 
 
415 aa  117  5e-25  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008048  Sala_1023  extracellular solute-binding protein  26.18 
 
 
422 aa  116  6.9999999999999995e-25  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.705733  normal 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  25.12 
 
 
446 aa  114  4.0000000000000004e-24  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_013131  Caci_7721  extracellular solute-binding protein family 1  27.29 
 
 
462 aa  112  1.0000000000000001e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  23.76 
 
 
430 aa  110  4.0000000000000004e-23  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  23.76 
 
 
430 aa  110  4.0000000000000004e-23  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_013172  Bfae_05710  ABC-type sugar transport system, periplasmic component  27.61 
 
 
425 aa  110  6e-23  Brachybacterium faecium DSM 4810  Bacteria  normal  0.13799  n/a   
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  27.83 
 
 
411 aa  107  5e-22  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  30.38 
 
 
437 aa  104  3e-21  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  31.96 
 
 
433 aa  103  4e-21  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_007802  Jann_3553  extracellular solute-binding protein  26.94 
 
 
419 aa  103  5e-21  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_014248  Aazo_0323  family 1 extracellular solute-binding protein  23.53 
 
 
432 aa  102  1e-20  'Nostoc azollae' 0708  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1296  extracellular solute-binding protein family 1  28.44 
 
 
443 aa  100  7e-20  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.190784  normal 
 
 
-
 
NC_009972  Haur_0298  extracellular solute-binding protein  25.21 
 
 
486 aa  99.8  7e-20  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25.58 
 
 
411 aa  99  1e-19  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  26.46 
 
 
406 aa  99  2e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  23.65 
 
 
432 aa  97.4  4e-19  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_011899  Hore_23010  extracellular solute-binding protein family 1  23.83 
 
 
436 aa  97.4  4e-19  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000978171  n/a   
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  23.7 
 
 
414 aa  97.4  4e-19  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  25.52 
 
 
439 aa  97.1  5e-19  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  27.35 
 
 
421 aa  97.1  5e-19  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  23.23 
 
 
450 aa  97.4  5e-19  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  26.53 
 
 
429 aa  97.1  6e-19  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  23.76 
 
 
432 aa  96.7  7e-19  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  24.42 
 
 
411 aa  95.5  1e-18  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013174  Jden_0381  extracellular solute-binding protein family 1  29.36 
 
 
445 aa  95.5  1e-18  Jonesia denitrificans DSM 20603  Bacteria  normal  0.491759  normal 
 
 
-
 
NC_012853  Rleg_5698  extracellular solute-binding protein family 1  26.33 
 
 
412 aa  95.1  2e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.145305  normal  0.141272 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  29.32 
 
 
430 aa  94.4  3e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_010003  Pmob_1492  extracellular solute-binding protein  25.84 
 
 
421 aa  94.4  3e-18  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2652  putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein  26.94 
 
 
408 aa  94  4e-18  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_1494  ABC-type sugar transport system periplasmic component-like protein  24.65 
 
 
438 aa  94.4  4e-18  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_2731  extracellular solute-binding protein family 1  22.99 
 
 
454 aa  93.2  8e-18  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013721  HMPREF0424_1316  extracellular solute-binding protein  23.93 
 
 
423 aa  92.8  1e-17  Gardnerella vaginalis 409-05  Bacteria  n/a    normal 
 
 
-
 
NC_013739  Cwoe_3983  extracellular solute-binding protein family 1  27.41 
 
 
456 aa  91.3  3e-17  Conexibacter woesei DSM 14684  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3982  extracellular solute-binding protein family 1  25.19 
 
 
435 aa  90.9  4e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_012669  Bcav_1711  extracellular solute-binding protein family 1  29.62 
 
 
454 aa  90.9  4e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.795485  normal 
 
 
-
 
NC_008262  CPR_2338  maltose-binding periplasmic protein precursor  26.94 
 
 
408 aa  90.5  5e-17  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  25.8 
 
 
412 aa  90.5  5e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  27.67 
 
 
426 aa  90.1  6e-17  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  26.59 
 
 
416 aa  90.1  6e-17  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_014210  Ndas_2345  extracellular solute-binding protein family 1  29.21 
 
 
424 aa  90.1  7e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.822896  normal  0.413258 
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  22 
 
 
420 aa  89  1e-16  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_1371  extracellular solute-binding protein family 1  28.37 
 
 
438 aa  89.4  1e-16  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_1614  extracellular solute-binding protein  27.06 
 
 
391 aa  88.2  2e-16  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000159886  n/a   
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  22.47 
 
 
420 aa  88.6  2e-16  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  24.67 
 
 
433 aa  89  2e-16  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  25.6 
 
 
479 aa  87.8  3e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  23.33 
 
 
410 aa  87.8  3e-16  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_013521  Sked_06560  ABC-type sugar transport system, periplasmic component  28.35 
 
 
453 aa  88.2  3e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  26.69 
 
 
429 aa  87.8  4e-16  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  28.86 
 
 
420 aa  87.4  4e-16  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  27.72 
 
 
421 aa  87.4  5e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  26.37 
 
 
419 aa  87.4  5e-16  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  23.53 
 
 
366 aa  87  6e-16  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  24.56 
 
 
425 aa  86.3  9e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  24.59 
 
 
435 aa  85.9  0.000000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_013093  Amir_1846  extracellular solute-binding protein family 1  25.74 
 
 
425 aa  86.3  0.000000000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.169612  n/a   
 
 
-
 
NC_009486  Tpet_1552  extracellular solute-binding protein  27.06 
 
 
391 aa  85.9  0.000000000000001  Thermotoga petrophila RKU-1  Bacteria  decreased coverage  0.000000398035  n/a   
 
 
-
 
NC_009636  Smed_2420  extracellular solute-binding protein  24.4 
 
 
420 aa  86.3  0.000000000000001  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.228974 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  24.8 
 
 
433 aa  86.3  0.000000000000001  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_012858  Rleg_6765  extracellular solute-binding protein family 1  24.53 
 
 
419 aa  85.9  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.979933  normal 
 
 
-
 
NC_011366  Rleg2_5852  extracellular solute-binding protein family 1  24.84 
 
 
419 aa  85.9  0.000000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012880  Dd703_0698  extracellular solute-binding protein family 1  23.98 
 
 
428 aa  84.7  0.000000000000002  Dickeya dadantii Ech703  Bacteria  normal  0.0317884  n/a   
 
 
-
 
NC_009636  Smed_2315  extracellular solute-binding protein  26.12 
 
 
455 aa  85.5  0.000000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  normal  0.271919 
 
 
-
 
NC_007413  Ava_1229  extracellular solute-binding protein  24.31 
 
 
461 aa  84.3  0.000000000000004  Anabaena variabilis ATCC 29413  Bacteria  normal  0.0257979  normal  0.868479 
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  22.99 
 
 
410 aa  84.3  0.000000000000004  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008148  Rxyl_0213  twin-arginine translocation pathway signal  24.85 
 
 
446 aa  84  0.000000000000005  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  24.62 
 
 
414 aa  83.6  0.000000000000006  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_012858  Rleg_6794  extracellular solute-binding protein family 1  24.61 
 
 
430 aa  83.6  0.000000000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_011370  Rleg2_6090  extracellular solute-binding protein family 1  24.37 
 
 
425 aa  83.6  0.000000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  22.68 
 
 
410 aa  83.6  0.000000000000006  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  22.68 
 
 
410 aa  83.6  0.000000000000007  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  24.06 
 
 
416 aa  83.2  0.000000000000009  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
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