| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sked_21150 |
|---|
| Symbol | |
|---|
| ID | 8633750 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sanguibacter keddieii DSM 10542 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013521 |
|---|
| Strand | + |
|---|
| Start bp | 2360845 |
|---|
| End bp | 2362131 |
|---|
| Gene Length | 1287 bp |
|---|
| Protein Length | 428 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | carbohydrate-binding protein |
|---|
| Protein accession | YP_003314869 |
|---|
| Protein GI | 269795414 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.396929 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.174783 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGATCC GACGACGACT GCTCGCCCCC ACCGCGATCG CCGCAGCCGC AGCACTGCTG
CTCGCCGGCT GCGGCCGCGA CACCGACTCC CCCGCACAGG CCGACGACGC CGTCGAGCTC
ACGAGCGGCC CTGCCTCCGG CACCGTGACC ATCTGGGCCC AGGGCACCGA GGGCGAGGCG
CTCACCGAGT TCATCAAGCC CTTCGAGGAG GCCAACCCCG ACGTCACCGT CAAGGTCACC
GCAGTCCCCT GGGACTCCGC GCAGAACAAG TACCAGACGG CCGTGGCGGG AGGGACGACC
CCCGACATCG GCATGCTCGG CAGCGACTGG ATGCCCACCT TCGCCAACGC CCTCCAGCCC
AAGCCCGAGG CGATCGACAC CTCCGGCATG TTCGACTTCG CGACGACGTC GACCACCTTC
GACGGCGTCG AGTACGCCGT CCCGTGGTAC GTCGAGACCC GCGTGCTGTT CTACCGCACC
GACCTCGCCG AGCAGGCCGG GTTCGACACC TTCCCCACCG ACTGGGACGG CTTCAAGGCC
CTCGCCCAGG CCTACCAGGA CGAGGCCGGC GCCGAGTACG GCGTCGCGCT CCCCTCCGGC
GGCTGGAACT CGTTCCTCAG CAGCCTCCCC TTCGCGTGGT CCAACGGGGC CGAGGTCATG
GACGCCGACC AGACCACCTG GACGCTCGAC ACCCCCGAGG TCACCGGCGC CGTCGACTAC
ATCGACAGCT TCTTCGCGGA CGGCATCGCC AACCGCAACC CTGACGCCGA GGCCGGCTCG
ACCACCGCGG CCTTCGTCGA CGGCTCCGTC CCGATGTTCA TGAGCGGGCC GTGGGACATC
CCCGGGCTCA AGACCGCCGG GGGCGAGGGC TTCGAGGACA AGTTCGGCGT CGGTCTCGTC
CCCGCGTCGC CGGACGGCAC CTCGACCTCC TTCGCCGCCG GCGCCAACCT CGCGGTCTTC
AAGGACGCCG AGAACCCCGA GGCCGCGTGG AAGCTCGTCG AGTGGCTCAG CCAGCCCGAG
GTCCAGGTCG ACTGGTTCAG CGCCGTCAAC GACCTCCCCG CCCAGGAGTC CGCCTGGGAC
GACCCGACGC TCACCGCAGA CCCCAAGGTC GCCGGCTTCG GCGAGCAGCT CAAGAGCGTC
AAGATCGCCC CGACCCTCAC CACCTGGCCC CAGGTCTCTG CCGCGGCAGA CACCCAGCTC
GAGCAGATCC TGCGCGGCGA CAAGGACCCG GCGGTCGCCC TCGGCGAGCT GCAGAGCACG
GCGGACTCCC TCGGGACCGG GCAGTGA
|
|---|
| Protein sequence | MMIRRRLLAP TAIAAAAALL LAGCGRDTDS PAQADDAVEL TSGPASGTVT IWAQGTEGEA
LTEFIKPFEE ANPDVTVKVT AVPWDSAQNK YQTAVAGGTT PDIGMLGSDW MPTFANALQP
KPEAIDTSGM FDFATTSTTF DGVEYAVPWY VETRVLFYRT DLAEQAGFDT FPTDWDGFKA
LAQAYQDEAG AEYGVALPSG GWNSFLSSLP FAWSNGAEVM DADQTTWTLD TPEVTGAVDY
IDSFFADGIA NRNPDAEAGS TTAAFVDGSV PMFMSGPWDI PGLKTAGGEG FEDKFGVGLV
PASPDGTSTS FAAGANLAVF KDAENPEAAW KLVEWLSQPE VQVDWFSAVN DLPAQESAWD
DPTLTADPKV AGFGEQLKSV KIAPTLTTWP QVSAAADTQL EQILRGDKDP AVALGELQST
ADSLGTGQ
|
|---|
| |