More than 300 homologs were found in PanDaTox collection
for query gene Bfae_05710 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



Page 1 of 3    << first  < prev  1  2  3    next >  last >>   


Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_05710  ABC-type sugar transport system, periplasmic component  100 
 
 
425 aa  853    Brachybacterium faecium DSM 4810  Bacteria  normal  0.13799  n/a   
 
 
-
 
NC_009664  Krad_3730  extracellular solute-binding protein family 1  48.69 
 
 
435 aa  372  1e-102  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.163607  normal  0.040318 
 
 
-
 
NC_013530  Xcel_1045  extracellular solute-binding protein family 1  38.01 
 
 
488 aa  256  6e-67  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0733801  n/a   
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  33.49 
 
 
422 aa  199  6e-50  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  34.92 
 
 
426 aa  199  9e-50  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_013174  Jden_0234  extracellular solute-binding protein family 1  35.04 
 
 
412 aa  197  3e-49  Jonesia denitrificans DSM 20603  Bacteria  normal  0.497123  normal 
 
 
-
 
NC_013172  Bfae_25450  ABC-type sugar transport system, periplasmic component  31.7 
 
 
430 aa  146  6e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0772443  n/a   
 
 
-
 
NC_013131  Caci_7201  extracellular solute-binding protein family 1  28.32 
 
 
447 aa  139  8.999999999999999e-32  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  30.6 
 
 
427 aa  122  9.999999999999999e-27  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_008578  Acel_0552  extracellular solute-binding protein  29.89 
 
 
445 aa  121  1.9999999999999998e-26  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.764632 
 
 
-
 
NC_013093  Amir_0446  extracellular solute-binding protein family 1  27.83 
 
 
424 aa  118  3e-25  Actinosynnema mirum DSM 43827  Bacteria  normal  0.900099  n/a   
 
 
-
 
NC_013595  Sros_2194  ABC-type sugar transport system periplasmic component-like protein  30.79 
 
 
443 aa  112  1.0000000000000001e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  28.21 
 
 
443 aa  111  2.0000000000000002e-23  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013131  Caci_7721  extracellular solute-binding protein family 1  27.82 
 
 
462 aa  107  4e-22  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  27.43 
 
 
425 aa  103  4e-21  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  28.25 
 
 
366 aa  101  3e-20  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  29.43 
 
 
424 aa  100  6e-20  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  26.81 
 
 
420 aa  99.8  9e-20  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  28.25 
 
 
411 aa  99.4  1e-19  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  27.87 
 
 
411 aa  95.9  1e-18  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  35.29 
 
 
459 aa  89.7  9e-17  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  25.76 
 
 
427 aa  86.7  7e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  27.81 
 
 
426 aa  85.5  0.000000000000002  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  23.38 
 
 
424 aa  82  0.00000000000002  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  25.85 
 
 
433 aa  80.1  0.00000000000008  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  27.06 
 
 
434 aa  78.2  0.0000000000002  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  29.69 
 
 
428 aa  78.6  0.0000000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  26.2 
 
 
406 aa  79  0.0000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_013947  Snas_2733  extracellular solute-binding protein family 1  28.7 
 
 
434 aa  76.3  0.000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.0602915  normal  0.13145 
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  25 
 
 
459 aa  76.3  0.000000000001  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_008254  Meso_3771  extracellular solute-binding protein  25.59 
 
 
421 aa  74.3  0.000000000003  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  26.01 
 
 
426 aa  74.7  0.000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3450  extracellular solute-binding protein family 1  25.79 
 
 
436 aa  73.2  0.000000000008  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1454  extracellular solute-binding protein family 1  29.08 
 
 
445 aa  72.4  0.00000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_010003  Pmob_0027  extracellular solute-binding protein  26.44 
 
 
413 aa  71.2  0.00000000003  Petrotoga mobilis SJ95  Bacteria  unclonable  0.0000000908101  n/a   
 
 
-
 
NC_013521  Sked_27350  ABC-type sugar transport system, periplasmic component  28.65 
 
 
444 aa  71.6  0.00000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.404715  normal  0.481515 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  27.35 
 
 
445 aa  71.2  0.00000000004  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_012912  Dd1591_3240  extracellular solute-binding protein family 1  25.22 
 
 
431 aa  70.9  0.00000000004  Dickeya zeae Ech1591  Bacteria  normal  n/a   
 
 
-
 
NC_010816  BLD_0192  MalE-type ABC sugar transport system periplasmic component  32.35 
 
 
463 aa  70.9  0.00000000004  Bifidobacterium longum DJO10A  Bacteria  normal  0.245721  n/a   
 
 
-
 
NC_009636  Smed_2358  extracellular solute-binding protein  24.48 
 
 
441 aa  70.9  0.00000000004  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2524  extracellular solute-binding protein family 1  25.97 
 
 
483 aa  70.5  0.00000000005  Thermobaculum terrenum ATCC BAA-798  Bacteria  decreased coverage  0.00000000331289  n/a   
 
 
-
 
NC_014210  Ndas_3999  extracellular solute-binding protein family 1  25.14 
 
 
452 aa  70.5  0.00000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.220113  normal  0.250177 
 
 
-
 
NC_008726  Mvan_2624  extracellular solute-binding protein  29.82 
 
 
444 aa  69.7  0.00000000008  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_008346  Swol_0405  ABC-type sugar transport system periplasmic component-like protein  24.62 
 
 
438 aa  69.7  0.00000000009  Syntrophomonas wolfei subsp. wolfei str. Goettingen  Bacteria  normal  n/a   
 
 
-
 
NC_012850  Rleg_3752  extracellular solute-binding protein family 1  25.21 
 
 
436 aa  69.7  0.00000000009  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.561914  normal 
 
 
-
 
NC_013411  GYMC61_0531  extracellular solute-binding protein family 1  28.08 
 
 
429 aa  69.3  0.0000000001  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_004578  PSPTO_2707  mannitol ABC transporter, periplasmic mannitol-binding protein  23.58 
 
 
440 aa  68.9  0.0000000002  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.069342  n/a   
 
 
-
 
NC_012880  Dd703_3168  extracellular solute-binding protein family 1  25.52 
 
 
419 aa  67.8  0.0000000003  Dickeya dadantii Ech703  Bacteria  normal  n/a   
 
 
-
 
NC_009921  Franean1_7049  extracellular solute-binding protein  23.69 
 
 
439 aa  68.2  0.0000000003  Frankia sp. EAN1pec  Bacteria  normal  0.0982583  normal 
 
 
-
 
NC_013595  Sros_3842  extracellular solute-binding protein family 1  24.57 
 
 
429 aa  67.4  0.0000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  0.0316121  normal  0.0422385 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  24.72 
 
 
427 aa  67.8  0.0000000004  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  23.02 
 
 
450 aa  67.4  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  29.93 
 
 
399 aa  67  0.0000000005  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_013172  Bfae_15380  ABC-type sugar transport system, periplasmic component  25.05 
 
 
465 aa  67  0.0000000006  Brachybacterium faecium DSM 4810  Bacteria  normal  0.479356  n/a   
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  23.33 
 
 
446 aa  67  0.0000000006  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  25.22 
 
 
412 aa  67  0.0000000006  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  30.74 
 
 
419 aa  67  0.0000000006  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  23.16 
 
 
414 aa  67  0.0000000006  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  26.13 
 
 
414 aa  67  0.0000000007  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  27.3 
 
 
443 aa  67  0.0000000007  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_011989  Avi_3567  ABC transporter substrate binding protein (sorbitol)  25.07 
 
 
439 aa  66.6  0.0000000008  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  24.61 
 
 
402 aa  66.6  0.0000000008  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013947  Snas_0758  extracellular solute-binding protein family 1  28.45 
 
 
443 aa  66.6  0.0000000009  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  25.83 
 
 
466 aa  65.9  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1874  MalE-type ABC sugar transport system periplasmic component  26.34 
 
 
427 aa  65.9  0.000000001  Bifidobacterium longum DJO10A  Bacteria  normal  0.0756635  n/a   
 
 
-
 
NC_013093  Amir_2832  extracellular solute-binding protein family 1  27.04 
 
 
417 aa  65.9  0.000000001  Actinosynnema mirum DSM 43827  Bacteria  normal  0.617934  n/a   
 
 
-
 
NC_010320  Teth514_2194  extracellular solute-binding protein  22.44 
 
 
414 aa  66.2  0.000000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00903267  n/a   
 
 
-
 
NC_009338  Mflv_3775  extracellular solute-binding protein  29.13 
 
 
441 aa  66.2  0.000000001  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal  0.394592 
 
 
-
 
NC_009654  Mmwyl1_2016  extracellular solute-binding protein  31.36 
 
 
408 aa  66.2  0.000000001  Marinomonas sp. MWYL1  Bacteria  hitchhiker  0.00148299  normal 
 
 
-
 
NC_011369  Rleg2_3622  extracellular solute-binding protein family 1  23.83 
 
 
412 aa  65.5  0.000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  26.96 
 
 
421 aa  65.5  0.000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  31.25 
 
 
433 aa  65.1  0.000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_011368  Rleg2_4978  extracellular solute-binding protein family 1  31.78 
 
 
437 aa  65.1  0.000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.346425  normal 
 
 
-
 
NC_013530  Xcel_1371  extracellular solute-binding protein family 1  27.27 
 
 
438 aa  64.7  0.000000003  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  26.82 
 
 
430 aa  64.3  0.000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  24.92 
 
 
410 aa  64.3  0.000000004  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_010159  YpAngola_A2082  carbohydrate ABC transporter periplasmic-binding protein  23.5 
 
 
422 aa  64.3  0.000000004  Yersinia pestis Angola  Bacteria  normal  0.890991  normal  0.0137332 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  24.86 
 
 
423 aa  64.3  0.000000004  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  24.28 
 
 
410 aa  63.9  0.000000005  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_008254  Meso_3777  extracellular solute-binding protein  24.13 
 
 
436 aa  63.5  0.000000006  Chelativorans sp. BNC1  Bacteria  normal  0.253936  n/a   
 
 
-
 
NC_007650  BTH_II1179  sugar ABC transporter, periplasmic sugar-binding protein, putative  30.15 
 
 
423 aa  63.5  0.000000007  Burkholderia thailandensis E264  Bacteria  normal  0.0916647  n/a   
 
 
-
 
NC_009972  Haur_0298  extracellular solute-binding protein  21.86 
 
 
486 aa  63.5  0.000000007  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009664  Krad_4147  extracellular solute-binding protein family 1  27.13 
 
 
441 aa  62.8  0.00000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.892231  normal 
 
 
-
 
NC_010465  YPK_2280  extracellular solute-binding protein  23.22 
 
 
422 aa  62.8  0.00000001  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009952  Dshi_0974  extracellular solute-binding protein family 1  23 
 
 
435 aa  63.2  0.00000001  Dinoroseobacter shibae DFL 12  Bacteria  normal  0.606433  normal  0.163223 
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  22.92 
 
 
430 aa  62.8  0.00000001  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  22.92 
 
 
430 aa  62.8  0.00000001  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_011661  Dtur_0508  extracellular solute-binding protein family 1  22.99 
 
 
421 aa  62.8  0.00000001  Dictyoglomus turgidum DSM 6724  Bacteria  hitchhiker  0.0000506303  n/a   
 
 
-
 
NC_008709  Ping_2008  ABC transporter extracellular solute-binding protein  30.32 
 
 
408 aa  62.8  0.00000001  Psychromonas ingrahamii 37  Bacteria  normal  0.247518  normal 
 
 
-
 
NC_010003  Pmob_0523  extracellular solute-binding protein  25.46 
 
 
416 aa  62.4  0.00000001  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011898  Ccel_1025  extracellular solute-binding protein family 1  24.67 
 
 
444 aa  62.4  0.00000001  Clostridium cellulolyticum H10  Bacteria  decreased coverage  0.00000399953  n/a   
 
 
-
 
NC_009708  YpsIP31758_2172  carbohydrate ABC transporter periplasmic-binding protein  26.32 
 
 
422 aa  62  0.00000002  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00849198  n/a   
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  24.2 
 
 
415 aa  62  0.00000002  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_008463  PA14_34420  putative binding protein component of ABC maltose/mannitol transporter  31.36 
 
 
436 aa  62  0.00000002  Pseudomonas aeruginosa UCBPP-PA14  Bacteria  hitchhiker  0.000870468  normal  0.425479 
 
 
-
 
NC_011370  Rleg2_6090  extracellular solute-binding protein family 1  27.11 
 
 
425 aa  62  0.00000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_010003  Pmob_0828  extracellular solute-binding protein  23.4 
 
 
424 aa  62.4  0.00000002  Petrotoga mobilis SJ95  Bacteria  normal  0.142269  n/a   
 
 
-
 
NC_014151  Cfla_3054  extracellular solute-binding protein family 1  31.54 
 
 
429 aa  62  0.00000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  normal  0.0183103 
 
 
-
 
NC_009972  Haur_1243  extracellular solute-binding protein  23.15 
 
 
444 aa  61.6  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0890  extracellular solute-binding protein  24.38 
 
 
450 aa  61.6  0.00000002  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.315589  n/a   
 
 
-
 
NC_008784  BMASAVP1_0065  putative sugar ABC transporter, periplasmic sugar-binding protein  29.15 
 
 
426 aa  61.6  0.00000003  Burkholderia mallei SAVP1  Bacteria  normal  n/a   
 
 
-
 
Page 1 of 3    << first  < prev  1  2  3    next >  last >>