Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | CPR_2338 |
Symbol | |
ID | 4204429 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Clostridium perfringens SM101 |
Kingdom | Bacteria |
Replicon accession | NC_008262 |
Strand | - |
Start bp | 2564446 |
End bp | 2565672 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 642566888 |
Product | maltose-binding periplasmic protein precursor |
Protein accession | YP_699603 |
Protein GI | 110802374 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 34 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGAAAAC GTACAAAAAT TCTAGCAACT GTAATGGCTG CAACAATGTT ATTTGCAGGA TCATTAGTAG GATGTGGAGA GAAAGCTGAT TCAGGTAGTA CTGATGGTTC AGGAAAAGAA CTTACAGTAT GGTCACATTT AACTACTCCA GAAGTAGAAG AATTAAATAA AATAGCTTCA AAATGGGGAG AAGAAAATGG AGTTAAAGTT AAGGTTGTAG AAGACAAATC AGAAATGCAA GCTTACATAC AAGCTGCAAA TAGTTCAAAG GGACCAGATA TAATGTTTGG ACTAGCTCAT GATAACTTAG GAACATTCCA AAAGGCTGGA CTTTTAGCAG AGGTTCCAGA AGGAATTATA AATGATTCTG ATTATGCATC ACATCAAGTT TTAGATGCTG TAACAATAGG TGGAAAAAGA TATGCAGTTC CAATAGCACA AGAAACATCA GCTCTTTTCT ATAATAAGGA TAAAGTTAAA GAAGTTCCAA AAACCATGGA AGATTTAGTT AAGGTTGCAA AAGATGGAGT TGGATTTGAA TATGATATTA ATAATTTCTA TCCTACTTAT GGATTTATAG CAGCAGATGG AGGATATGTT TATAAAGATA ATAATGGAAC TCTTGACCCA ACTGATATCG GATTAGGAAC ACCAGGAGCT ATAAAAGGAT ATCAATTTGT TCAAGATTTA GTTCAAAAAG ATAAATTAAT GCCAGCTGAT ATAACTGGAG ATATAGCAAA GGGAGATTTC TTATCTAAGA AATCAGGATT TTATATTTCA GGACCTTGGG ATATATCAGC ATTTAAAGAT GGAGGAGTAA ATTTTGGAGT AGCTCCAATG CCAACATTAT TTGAAAAACA AGTACCAACT TTCTTAGGTG TTCAAACTGC TTTCGTAAGT GAAAAATCTC AGAATAAAGA TTTAGCATGG AAATTAGTTA AATACTTATC AGAAAATTCA GGTGATGTAT TGTTAAGTAA AGGTAACAGA ATTCCAGTAT TAAATAAATA CTTAGATAGT GCAGATTTCA AAAATAATGA GTATATGAGT GCTTTCGCAG AACAAGCTAA ATTCGCTACA CCAATGCCTA ATATACCAGA AATTCAAGCT ATGTGGGGAC CTGCTGGAGC TAACTTACAA TTATTAACTT CAGGACAAGT TACACCAGAA AAATGTGCTG AAATGACAGT AGAACAAATT AAACAAGGTA TATCTCAACA AAAATAA
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Protein sequence | MGKRTKILAT VMAATMLFAG SLVGCGEKAD SGSTDGSGKE LTVWSHLTTP EVEELNKIAS KWGEENGVKV KVVEDKSEMQ AYIQAANSSK GPDIMFGLAH DNLGTFQKAG LLAEVPEGII NDSDYASHQV LDAVTIGGKR YAVPIAQETS ALFYNKDKVK EVPKTMEDLV KVAKDGVGFE YDINNFYPTY GFIAADGGYV YKDNNGTLDP TDIGLGTPGA IKGYQFVQDL VQKDKLMPAD ITGDIAKGDF LSKKSGFYIS GPWDISAFKD GGVNFGVAPM PTLFEKQVPT FLGVQTAFVS EKSQNKDLAW KLVKYLSENS GDVLLSKGNR IPVLNKYLDS ADFKNNEYMS AFAEQAKFAT PMPNIPEIQA MWGPAGANLQ LLTSGQVTPE KCAEMTVEQI KQGISQQK
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