More than 300 homologs were found in PanDaTox collection
for query gene Krad_3730 on replicon NC_009664
Organism: Kineococcus radiotolerans SRS30216



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_009664  Krad_3730  extracellular solute-binding protein family 1  100 
 
 
435 aa  878    Kineococcus radiotolerans SRS30216  Bacteria  normal  0.163607  normal  0.040318 
 
 
-
 
NC_013172  Bfae_05710  ABC-type sugar transport system, periplasmic component  49.61 
 
 
425 aa  375  1e-103  Brachybacterium faecium DSM 4810  Bacteria  normal  0.13799  n/a   
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  33.33 
 
 
422 aa  217  4e-55  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  36.64 
 
 
426 aa  212  1e-53  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_013530  Xcel_1045  extracellular solute-binding protein family 1  34.27 
 
 
488 aa  210  3e-53  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0733801  n/a   
 
 
-
 
NC_013174  Jden_0234  extracellular solute-binding protein family 1  34.13 
 
 
412 aa  187  5e-46  Jonesia denitrificans DSM 20603  Bacteria  normal  0.497123  normal 
 
 
-
 
NC_013131  Caci_7201  extracellular solute-binding protein family 1  30.1 
 
 
447 aa  149  1.0000000000000001e-34  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_25450  ABC-type sugar transport system, periplasmic component  30.43 
 
 
430 aa  135  9.999999999999999e-31  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0772443  n/a   
 
 
-
 
NC_008578  Acel_0552  extracellular solute-binding protein  27.96 
 
 
445 aa  130  3e-29  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.764632 
 
 
-
 
NC_013131  Caci_7721  extracellular solute-binding protein family 1  29.19 
 
 
462 aa  123  7e-27  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0446  extracellular solute-binding protein family 1  26.01 
 
 
424 aa  120  3.9999999999999996e-26  Actinosynnema mirum DSM 43827  Bacteria  normal  0.900099  n/a   
 
 
-
 
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  26.18 
 
 
425 aa  113  6e-24  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_013595  Sros_2194  ABC-type sugar transport system periplasmic component-like protein  29.19 
 
 
443 aa  113  6e-24  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  29.41 
 
 
443 aa  110  5e-23  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  26.57 
 
 
420 aa  109  1e-22  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  33.86 
 
 
459 aa  88.2  2e-16  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  25.89 
 
 
427 aa  88.6  2e-16  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_013946  Mrub_2058  extracellular solute-binding protein family 1  26.2 
 
 
435 aa  85.9  0.000000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  normal  0.617385 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  27.83 
 
 
366 aa  83.6  0.000000000000007  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  22.7 
 
 
424 aa  82.8  0.00000000000001  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.64 
 
 
411 aa  82  0.00000000000002  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  26.32 
 
 
411 aa  80.1  0.00000000000007  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7516  extracellular solute-binding protein family 1  26.4 
 
 
452 aa  79.7  0.00000000000008  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_0758  extracellular solute-binding protein family 1  27.62 
 
 
443 aa  79.3  0.0000000000001  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal 
 
 
-
 
NC_007963  Csal_0633  extracellular solute-binding protein  24.44 
 
 
436 aa  79  0.0000000000002  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.131479  n/a   
 
 
-
 
NC_014212  Mesil_0158  extracellular solute-binding protein family 1  25.56 
 
 
435 aa  78.6  0.0000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.317406 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  25 
 
 
446 aa  78.2  0.0000000000003  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_011368  Rleg2_4978  extracellular solute-binding protein family 1  24.61 
 
 
437 aa  75.9  0.000000000001  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  0.346425  normal 
 
 
-
 
NC_009972  Haur_0298  extracellular solute-binding protein  25.65 
 
 
486 aa  75.9  0.000000000001  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  26.15 
 
 
430 aa  74.7  0.000000000003  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  26.15 
 
 
430 aa  74.3  0.000000000004  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_009077  Mjls_4737  extracellular solute-binding protein  25.06 
 
 
455 aa  74.3  0.000000000004  Mycobacterium sp. JLS  Bacteria  normal  normal 
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  30.17 
 
 
424 aa  73.9  0.000000000005  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  24.86 
 
 
434 aa  73.6  0.000000000006  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_013517  Sterm_4040  extracellular solute-binding protein family 1  27.93 
 
 
434 aa  73.6  0.000000000007  Sebaldella termitidis ATCC 33386  Bacteria  normal  n/a   
 
 
-
 
NC_013739  Cwoe_0374  extracellular solute-binding protein family 1  24.48 
 
 
458 aa  73.2  0.000000000009  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0240532 
 
 
-
 
NC_008148  Rxyl_0062  extracellular solute-binding protein  25.31 
 
 
436 aa  72.8  0.00000000001  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  23.66 
 
 
427 aa  72.8  0.00000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  30.2 
 
 
406 aa  72  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_007492  Pfl01_2640  extracellular solute-binding protein  29.64 
 
 
436 aa  71.6  0.00000000002  Pseudomonas fluorescens Pf0-1  Bacteria  normal  0.932575  normal 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  23.12 
 
 
423 aa  72.4  0.00000000002  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  24.27 
 
 
426 aa  72.4  0.00000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_008146  Mmcs_4357  extracellular solute-binding protein  24.55 
 
 
455 aa  71.6  0.00000000003  Mycobacterium sp. MCS  Bacteria  normal  0.200959  n/a   
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  29.33 
 
 
410 aa  71.2  0.00000000003  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_008705  Mkms_4443  extracellular solute-binding protein  24.55 
 
 
455 aa  71.6  0.00000000003  Mycobacterium sp. KMS  Bacteria  normal  normal  0.0226595 
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  32.63 
 
 
433 aa  70.9  0.00000000004  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_013131  Caci_2031  extracellular solute-binding protein family 1  26.13 
 
 
442 aa  70.9  0.00000000004  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.298737 
 
 
-
 
NC_004578  PSPTO_2707  mannitol ABC transporter, periplasmic mannitol-binding protein  30.08 
 
 
440 aa  70.5  0.00000000005  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  0.069342  n/a   
 
 
-
 
NC_009654  Mmwyl1_0777  extracellular solute-binding protein  31.45 
 
 
428 aa  70.5  0.00000000005  Marinomonas sp. MWYL1  Bacteria  normal  normal 
 
 
-
 
NC_010580  Bind_3793  extracellular solute-binding protein  27.76 
 
 
437 aa  70.5  0.00000000006  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  0.8374  normal  0.742912 
 
 
-
 
NC_009338  Mflv_3775  extracellular solute-binding protein  28.14 
 
 
441 aa  70.5  0.00000000006  Mycobacterium gilvum PYR-GCK  Bacteria  normal  0.577316  normal  0.394592 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  29.33 
 
 
410 aa  70.1  0.00000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_010581  Bind_2463  extracellular solute-binding protein  27.08 
 
 
437 aa  70.1  0.00000000007  Beijerinckia indica subsp. indica ATCC 9039  Bacteria  normal  normal  0.493581 
 
 
-
 
NC_013530  Xcel_1371  extracellular solute-binding protein family 1  31.22 
 
 
438 aa  70.1  0.00000000008  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  22.57 
 
 
459 aa  70.1  0.00000000008  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  30.38 
 
 
410 aa  69.3  0.0000000001  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_014151  Cfla_1126  extracellular solute-binding protein family 1  28.57 
 
 
433 aa  68.9  0.0000000002  Cellulomonas flavigena DSM 20109  Bacteria  normal  0.162135  hitchhiker  0.000581091 
 
 
-
 
NC_008688  Pden_4845  extracellular solute-binding protein  26.8 
 
 
434 aa  68.6  0.0000000002  Paracoccus denitrificans PD1222  Bacteria  normal  0.834917  normal 
 
 
-
 
NC_008726  Mvan_2624  extracellular solute-binding protein  26.82 
 
 
444 aa  68.6  0.0000000002  Mycobacterium vanbaalenii PYR-1  Bacteria  normal  normal 
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  28.45 
 
 
429 aa  68.6  0.0000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009668  Oant_3854  extracellular solute-binding protein  26.17 
 
 
439 aa  68.9  0.0000000002  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  23.25 
 
 
429 aa  67.8  0.0000000003  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_014211  Ndas_5074  extracellular solute-binding protein family 1  28.38 
 
 
447 aa  67.8  0.0000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2504  extracellular solute-binding protein family 1  29.74 
 
 
442 aa  67.8  0.0000000004  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_0203  extracellular solute-binding protein family 1  26.05 
 
 
441 aa  67.4  0.0000000005  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.346278  normal  0.123927 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  30.9 
 
 
414 aa  67.4  0.0000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_009439  Pmen_4468  extracellular solute-binding protein  29.17 
 
 
436 aa  67.4  0.0000000005  Pseudomonas mendocina ymp  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  29.7 
 
 
450 aa  66.6  0.0000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  25.17 
 
 
403 aa  66.6  0.0000000008  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  27.92 
 
 
426 aa  66.2  0.0000000009  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  29.29 
 
 
412 aa  65.9  0.000000001  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_007005  Psyr_2440  extracellular solute-binding protein  27.8 
 
 
440 aa  66.2  0.000000001  Pseudomonas syringae pv. syringae B728a  Bacteria  normal  0.0811647  decreased coverage  0.000336324 
 
 
-
 
NC_013172  Bfae_29010  ABC-type sugar transport system, periplasmic component  32.02 
 
 
434 aa  66.2  0.000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  24.21 
 
 
433 aa  65.5  0.000000002  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_011886  Achl_1199  extracellular solute-binding protein family 1  25.54 
 
 
432 aa  65.1  0.000000002  Arthrobacter chlorophenolicus A6  Bacteria  n/a    hitchhiker  0.0000000829014 
 
 
-
 
NC_013521  Sked_03920  carbohydrate-binding protein  29.41 
 
 
437 aa  65.5  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011369  Rleg2_3450  extracellular solute-binding protein family 1  27.43 
 
 
436 aa  65.1  0.000000002  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_009436  Ent638_3292  extracellular solute-binding protein  27.37 
 
 
428 aa  65.5  0.000000002  Enterobacter sp. 638  Bacteria  normal  normal  0.309737 
 
 
-
 
NC_013521  Sked_11540  ABC-type sugar transport system, periplasmic component  31.95 
 
 
428 aa  65.5  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal  0.0159385 
 
 
-
 
NC_013521  Sked_06560  ABC-type sugar transport system, periplasmic component  27.75 
 
 
453 aa  64.7  0.000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  25.47 
 
 
402 aa  64.7  0.000000003  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_013421  Pecwa_2395  extracellular solute-binding protein family 1  33.33 
 
 
451 aa  64.7  0.000000003  Pectobacterium wasabiae WPP163  Bacteria  normal  n/a   
 
 
-
 
NC_010159  YpAngola_A2082  carbohydrate ABC transporter periplasmic-binding protein  27.05 
 
 
422 aa  64.3  0.000000004  Yersinia pestis Angola  Bacteria  normal  0.890991  normal  0.0137332 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  25.55 
 
 
410 aa  64.3  0.000000004  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_012917  PC1_2102  extracellular solute-binding protein family 1  33.33 
 
 
439 aa  64.3  0.000000004  Pectobacterium carotovorum subsp. carotovorum PC1  Bacteria  normal  n/a   
 
 
-
 
NC_010465  YPK_2280  extracellular solute-binding protein  27.05 
 
 
422 aa  64.3  0.000000004  Yersinia pseudotuberculosis YPIII  Bacteria  normal  n/a   
 
 
-
 
NC_009708  YpsIP31758_2172  carbohydrate ABC transporter periplasmic-binding protein  27.05 
 
 
422 aa  64.3  0.000000004  Yersinia pseudotuberculosis IP 31758  Bacteria  hitchhiker  0.00849198  n/a   
 
 
-
 
NC_011831  Cagg_0729  extracellular solute-binding protein family 1  25.38 
 
 
443 aa  63.9  0.000000005  Chloroflexus aggregans DSM 9485  Bacteria  decreased coverage  0.0000254304  normal 
 
 
-
 
NC_009485  BBta_0915  putative ABC transporter, periplasmic binding protein  27.15 
 
 
443 aa  63.9  0.000000005  Bradyrhizobium sp. BTAi1  Bacteria  normal  normal  0.779259 
 
 
-
 
NC_009921  Franean1_1895  extracellular solute-binding protein  25 
 
 
445 aa  64.3  0.000000005  Frankia sp. EAN1pec  Bacteria  normal  0.854658  normal 
 
 
-
 
NC_009656  PSPA7_2925  putative maltose/mannitol ABC transporter binding protein subunit  34.38 
 
 
436 aa  63.9  0.000000005  Pseudomonas aeruginosa PA7  Bacteria  normal  0.732093  n/a   
 
 
-
 
NC_013169  Ksed_20490  ABC-type sugar transport system, periplasmic component  27 
 
 
436 aa  63.5  0.000000006  Kytococcus sedentarius DSM 20547  Bacteria  normal  0.0446112  normal  0.538576 
 
 
-
 
NC_014210  Ndas_3999  extracellular solute-binding protein family 1  25.86 
 
 
452 aa  63.5  0.000000006  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.220113  normal  0.250177 
 
 
-
 
NC_013235  Namu_0184  extracellular solute-binding protein family 1  31.69 
 
 
450 aa  63.9  0.000000006  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013517  Sterm_0719  extracellular solute-binding protein family 1  25.54 
 
 
413 aa  63.9  0.000000006  Sebaldella termitidis ATCC 33386  Bacteria  normal  0.0236757  n/a   
 
 
-
 
NC_012850  Rleg_3752  extracellular solute-binding protein family 1  27 
 
 
436 aa  63.5  0.000000007  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.561914  normal 
 
 
-
 
NC_007951  Bxe_A0720  ABC sugar transporter, periplasmic ligand binding protein  24.93 
 
 
440 aa  63.2  0.000000008  Burkholderia xenovorans LB400  Bacteria  decreased coverage  0.000000241977  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  25.86 
 
 
410 aa  63.2  0.000000008  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_009636  Smed_2358  extracellular solute-binding protein  27.73 
 
 
441 aa  63.2  0.000000009  Sinorhizobium medicae WSM419  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_4015  extracellular solute-binding protein family 1  26.19 
 
 
434 aa  63.2  0.000000009  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0770441 
 
 
-
 
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