| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | YpsIP31758_2172 |
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| Symbol | |
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| ID | 5387186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Yersinia pseudotuberculosis IP 31758 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009708 |
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| Strand | - |
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| Start bp | 2497608 |
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| End bp | 2498876 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 640865159 |
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| Product | carbohydrate ABC transporter periplasmic-binding protein |
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| Protein accession | YP_001401145 |
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| Protein GI | 153948120 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 0.00849198 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATAA AAAAAATAGG TATCGCAGGT ATTATCGGCA CGTTGCTGAT GGCGAGTAAC
GCCAGCGCAC AGGAAACCCT CCGTGTACTG CTCGAAGGGC ACAGCACCAG CGACTCGATA
AAAGCACTGT TACCCGAATT CGAAAAGCAG ACCGGTATTA AGGTTCAGGC AGAGATAGTA
CCTTACAGCG ATCTGACCTC TAAAGCCCTG CTGGCCTTCT CCTCGCACAG TGGACGTTAC
GACGTGGTTA TGGATGACTG GGTGCATGCA GTAGGTTACG CCTCTGCTGG TTATATCACA
CCTGTAGATC AGTGGATGGA GAGTGATACC GCCTTCTACG ATGGTGCGGA TTTCGTCAAA
AGCTATGCTG ATACGCTGCG TTATAAAGAC GGTTATTACG GGCTGCCAGT CTATGGTGAA
AGTACCTTCC TGATGTACCG CAAAGACCTG TTTGAACAGT ACGGTATCGC CGTGCCGAAA
ACCTTTGATG AGCTGACCGC TGCGGCAAAA ACCATCAAAG AGAAGACCGA AGGTAAGGTG
GCGGGTATTA CGCTCCGTGG AGCTCAGGGG ATCCAGAACA CCTTTGCATG GGCGTCATTC
CTCTGGGGTT ACGGCGGCCA GTGGATTGAC GACAACGGAA AATCTGCAAT TGCTTCGCCA
CAGGCGGTAG AAGCCACCAA GTCATTCGTC AATATCCTGA AAAACTACGG GCCGATCGGC
GCGGCTAACT TCGGCTGGCA GGAAAACCGC TTGGTATTCC AGCAGGGTAA AGCGGCAATG
ACTATCGATT CGACAGTGAA CGGGGGCTTC AACGAAGACC CGAAAGAGTC TACGGTCGTC
GGTAAAGTGG GCTATGCCCC GGTACCGGTA CAGCCAGGCG ATCATCCAGG TAACAGCGGC
GCACTTCAGG TGCATGGCTT GTATATCTCC AGCGACAGTA AGAAGCAGGA TGCTGCCTGG
AAATTTATCA GTTGGGCAAC GGACAAACAG ACGCAGATGA AGTCGGTCGA ACTGAATCCT
AACGCCGGTG TGAGTTCACT CAGTGCCATC AACAGTGATG CCTTCACCAA GCGTTACGGG
GCCTTTAAGG ACGGTATGCT CGCAGCATTG CAAAACGGCA ATGCGAAATA CCTCCCAACC
ATTCCGCAGT CTACACAGAT TATCAACATA ACCGGTATTG CTCTATCCGA GGCACTGGCA
GGTACTCAGA CAGTAGAAAA TGCCCTTCAG CAAGCCAACA CCCGTAATGA TAAAGCGTTG
TCCCGTTAA
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| Protein sequence | MSIKKIGIAG IIGTLLMASN ASAQETLRVL LEGHSTSDSI KALLPEFEKQ TGIKVQAEIV
PYSDLTSKAL LAFSSHSGRY DVVMDDWVHA VGYASAGYIT PVDQWMESDT AFYDGADFVK
SYADTLRYKD GYYGLPVYGE STFLMYRKDL FEQYGIAVPK TFDELTAAAK TIKEKTEGKV
AGITLRGAQG IQNTFAWASF LWGYGGQWID DNGKSAIASP QAVEATKSFV NILKNYGPIG
AANFGWQENR LVFQQGKAAM TIDSTVNGGF NEDPKESTVV GKVGYAPVPV QPGDHPGNSG
ALQVHGLYIS SDSKKQDAAW KFISWATDKQ TQMKSVELNP NAGVSSLSAI NSDAFTKRYG
AFKDGMLAAL QNGNAKYLPT IPQSTQIINI TGIALSEALA GTQTVENALQ QANTRNDKAL
SR
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