| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pmen_4468 |
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| Symbol | |
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| ID | 5107163 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pseudomonas mendocina ymp |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009439 |
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| Strand | + |
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| Start bp | 4897003 |
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| End bp | 4898313 |
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| Gene Length | 1311 bp |
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| Protein Length | 436 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 640505739 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_001189947 |
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| Protein GI | 146309482 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 64 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCACG CCGTCAAAGC ACTCCTTGCA ACCTCTTGCC TGTCCCTCGC CACGGGCGCC
CACGGCGCCG AAACCCTGAC CATCGCCACG GTCAACAATA GCGACATGAT CCGCATGCAG
CGGCTGGCCA AGACCTTCGA AGAGCAGAAC CCCGACATCC GCCTGAAGTG GGTGGTGCTC
GAGGAGAACG TGCTGCGCCA GCGCCTGACC ACCGATATCG CCACCCAGGG CGGCCAGTTC
GACGTGCTCA CCATCGGCAT GTACGAAGCG GCGCTGTGGG GCGAGAAGGG CTGGCTGGAG
CCGATGACCG AACTGCCGGC CGACTACGAC CTCGACGACG TCTTCCCCTC GGTGCGCGAA
GGCCTGTCCG CCAAGGGCAC GCTGTATGCC CTGCCGTTCT ACGCCGAAGC CTCGATCACC
TACTACCGCA AGGACCTGTT CGAGCAGGCC GGTCTGAACA TGCCCGAACA GCCGACCTGG
GAGCAGATGG CCGAGTTCGC CGCCAAGCTG CACCAGCCGG ACAAGGGCCA GTACGGCCTG
TGCCTGCGCG GCAAGGCCGG CTGGGGCGAG AACATGGCGC TGATCACCAC CCTGGCCAAT
GCCCATGGAG CGCGCTGGTT CGACGAGCAG TGGCAGCCGG AATTCACCGG CAGCGAGTGG
CAGAGCGCGC TCAATTTCTA CGTCGACAAC ATGAAGAAGT ACGGCCCGCC CGGCGCCTCC
AGCAACGGTT TCAACGAGAA CCTGGCGCTG TTCAACAGCG GCAAGTGCGC GCTGTGGGTC
GATGCCAGCG TGGCCGGCTC CTTCGTCACC GACACCTCGC AGAGCAAGGT CGCCGATGCC
GTCGGCTTCA CCTTCGCGCC GACCCAGGTC ACCGACAAGG GCGCCTCCTG GCTGTACTCC
TGGGCCCTGG CGATTCCCAC CAGCTCCAAG TCCAAGGACG CCGCCAAGGC CTTCAGCGCC
TGGGCCACCT CCAAGGCCTA TGCCGAGCTG GTGGCCGAGC GCGATGGCGT GGCCAACGTG
CCGCCGGGCA CCCGCGCCTC GACCTACAGC GATGCCTACA TGCAGGCCGC GCCGTTCGCC
AAGGTCACCC TGGATTCGCT GCAAAAGGCC GACCCGGCCG ACCCCAGCGC CAAGCCGGTG
CCTTATGTCG GCATCCAGCT GGTGACCATT CCCGAGTTCC AGGCCATCGG CACCCAGGTC
GGCAAGCTGT TCACCGCCGC ATTGACCGGG CAGATGCAGC CACAGCAGGC GCTGCAGGCC
GCGCAGCAGA GCACGACTCG GGAAATGAAG CGCGCCGGGT ATCCGAAGTA A
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| Protein sequence | MNHAVKALLA TSCLSLATGA HGAETLTIAT VNNSDMIRMQ RLAKTFEEQN PDIRLKWVVL
EENVLRQRLT TDIATQGGQF DVLTIGMYEA ALWGEKGWLE PMTELPADYD LDDVFPSVRE
GLSAKGTLYA LPFYAEASIT YYRKDLFEQA GLNMPEQPTW EQMAEFAAKL HQPDKGQYGL
CLRGKAGWGE NMALITTLAN AHGARWFDEQ WQPEFTGSEW QSALNFYVDN MKKYGPPGAS
SNGFNENLAL FNSGKCALWV DASVAGSFVT DTSQSKVADA VGFTFAPTQV TDKGASWLYS
WALAIPTSSK SKDAAKAFSA WATSKAYAEL VAERDGVANV PPGTRASTYS DAYMQAAPFA
KVTLDSLQKA DPADPSAKPV PYVGIQLVTI PEFQAIGTQV GKLFTAALTG QMQPQQALQA
AQQSTTREMK RAGYPK
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