| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7516 |
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| Symbol | |
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| ID | 8338886 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 8707458 |
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| End bp | 8708816 |
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| Gene Length | 1359 bp |
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| Protein Length | 452 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 644960595 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003118182 |
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| Protein GI | 256396618 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGAACCG TGACACCCCG AACAGCGAGA TCTTTGTGCG CCGTGGCAGT CGCCGCCGGC
GTCGCGATAT CCGGCAGCGC GTGCAGCAGC AGTTCGAGCA GTTCCTCCGG CGCGTCCACG
TCCAAGAACG CGGCGGCGGC CGGCACGATC AACGTCTGGA TCCGCGGCGC CGGCGACTCG
CCGAAGGCGT ACCAGAAGAT CTTCGACGCG TTCACCGCGC AGACCGGCAT CAAGGTCACG
ATCGGCAAGG CCACGCTGAC CGACTTCGAG ACCGCGCTCA CCGCCGCCGC CTCGGCGCAC
CAGCTGCCCG ACATGGTCGT GGACGACGCC GCGCAGATGG GCAGCTTCGT CTCCCAGGGC
ATCGTCCTGC CGGTCGCCAA GAGCAGCTTC ACCGGCGCCG ACCAGCTCAC CGACCAGTCG
TGGGCCTCGG CCACCGATCT GAAGGGCCAG GTCTACGCCG TGCCGTTCTC GGCGCAGGCC
AACGTTCTGC TGATCCGCAA GGACTGGCTG GACAAGCTCG GCCTGCAGCC GCCGAAGAGC
TGGGACGACC TGGCCAAGGT CGCGCAGGCC TTCACCGCCA AGGACCCGGA CGGCGACGGC
AAGAACGACA CCTACGGCCT GGCCGTCCCC GGTTCCACCT CGCGCGGCTA CACCTCGTGG
TTCTGGTCCA CGTTCCTGTA CTCCGCGGGC GGGGACTACC TGAAGGCCGG CGGCGGCAAG
TTCACCGCGA CCGTGGGCTC CCCGCAGGCC GTGTCCTCGG CGCAGTTCCT GGAGGACCAG
GTCTGCAAGA ACAAGGACGT GCAGCCCTCG GCGCTCGGGG ACGACACCAC CGCGACGAAC
AAGGCGTTCC AGACCGGCGT GGCGGGTATG TACCTGACCG GTCCGTACGC CTACGCGACG
ATGGACGCCA CCGCGGTCAA GGGCAAGTAC ATCGTGGTCG CCCCGCCGAC CGGTCCCGAC
GGCACCGCCG GGACGCTCGC GGAGGGCACC GACATCTTCA CCATGGCCGA CAGCAAGCAG
GACGAGGTGA CCAAGCTCGA GGAGTTCATG GTCACCCCGG ACGCGCAGAA GCTCGGCATG
AGCGCGGTCC CGACCGCCAC GATCGTCCGG CTGCCGGTCA ACAAGACCGT CGACGCCTCC
GCGGTGCACG GCGACGACCC GCGCTGGCAG CTGGCCCAGC AGGTCTACAG CAGCTCGGGC
CACTATGAGT ACGACAACGC GCCGAACTGG ACGCAGCTGC GCCAGAAGAT GTCGGACGAC
CTCAACAAGC TGCTGTCCTC CTGCGGGAAC GTGCAGACCG CGATGACCTC GATGAACGCC
GACGTGGCCG CGCTCCTGAA GCAGCAGGGC GTCGGATGA
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| Protein sequence | MRTVTPRTAR SLCAVAVAAG VAISGSACSS SSSSSSGAST SKNAAAAGTI NVWIRGAGDS
PKAYQKIFDA FTAQTGIKVT IGKATLTDFE TALTAAASAH QLPDMVVDDA AQMGSFVSQG
IVLPVAKSSF TGADQLTDQS WASATDLKGQ VYAVPFSAQA NVLLIRKDWL DKLGLQPPKS
WDDLAKVAQA FTAKDPDGDG KNDTYGLAVP GSTSRGYTSW FWSTFLYSAG GDYLKAGGGK
FTATVGSPQA VSSAQFLEDQ VCKNKDVQPS ALGDDTTATN KAFQTGVAGM YLTGPYAYAT
MDATAVKGKY IVVAPPTGPD GTAGTLAEGT DIFTMADSKQ DEVTKLEEFM VTPDAQKLGM
SAVPTATIVR LPVNKTVDAS AVHGDDPRWQ LAQQVYSSSG HYEYDNAPNW TQLRQKMSDD
LNKLLSSCGN VQTAMTSMNA DVAALLKQQG VG
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