Gene Snas_0758 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_0758 
Symbol 
ID8881942 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp800882 
End bp802213 
Gene Length1332 bp 
Protein Length443 aa 
Translation table11 
GC content68% 
IMG OID 
Productextracellular solute-binding protein family 1 
Protein accessionYP_003509563 
Protein GI291298285 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTCGTC GAACATTGAC CCGAACCACT GCCCTGGTCG TGACCGCCGT TCTCGCGGGC 
GGTCTGGTGG CCTGCTCCGG TTCCGCGGCC GAGGTCCCGC AGGACGAGAA CGCGCGACTG
GACATCTGGA CCCGCCGACC ACCCGGCGAC CCCTCCGAAC AGGTCTCCAA GGACCTCGCC
AAGGCCTTCA CGAAGAAGAC CGGCATCCCC ACCAAGGTGA CCGCGATCTT CGACGACTTC
GAGACCAAAC TCCAGCAGGC CGCCTCCCAG AAGGACCTGC CGGACATCGT CATCAACGAC
ACCGCCCAGC TGGGCACCCT CGTCGACCAG GGCATCGTCC GCGAGGTCGA CCCCGGCGAG
GTGAGCCGAA CCAAGGACAT CTCCGACAAG GCCTGGGACG CCACCAAAGC CTTCGACGGC
AAGCACTACG CGGTGCCGTT CTCGGCACAG GCGTTCGCGC TGTTCATCCG CTCCGACTGG
CGAAAGGCCG TCGGCGCCGA GGTGCCGAAG ACCTGGGACG ACCTGGACGC GCTGGCCAAG
AAGTTCACCA AGGACGACCC GGACGGCAAC GGTGAGGACG ACACCTACGG CTGGGTCGTG
CCCGGCTCCA CCAAACGCGG CTACGCCTCC TGGTACCTGT CCAGCTTCCT GTGGTCGTCC
GGCGCCGACT ACTTCTCCGG CTCCGGGACG AAACTGGCCC CCGCCATCGA CAGCCCCGAG
GCCGCCGCGA CCCTGTCCTG GTTCCAGAAG TCGTTCTGCG ACAAGACAGT GGTGCCCGGA
TCCGAGACCG CCGAGACCGC CGCCGCCCAC CCCTACTTCG ACTCCGGGAC CGGCGGCATG
TACCTGACCG GCCCCTACAA CATGGCCCGC TTCGACGAGG CGGTCGGCGA GGGCAAGGTC
GAGGTGGTGC CGCTGCCCGC CGGCCCCGGC GGCGAGGCCA CGGCACTGGC CGAAGGCGAG
AACACCTACC TGATGGCCGG TTCGGCCAAT GAGGCCGGAC AGCTGAAGTT CGCCGAGTTC
GCCGCCTCCC CCGCCGGGCA GAAGATCGGC ATGAACGGCG ACGAGAACGG CAGCATCGTG
CGACTGCCGA TCAACACGAC CGTCGACATG GCCGCCGAGC GCAAGGACGA ACGCTGGCAG
ACCTTCAACG ACATCTACAC CGACGCCAGC CGTTACGTGC CGACGGTTCC CGACTGGACC
CCGTTCCTGC AGTCCTCCGC GAAGACCTTC AACGCGGTGG CCTCCGACTG CGAGGCCGAC
CCCGAGTCCG AACTGGAGGC ACTGGCGAAG GACTTCGCCA CCGAGCTCGA ATCCCAGCGG
GCGGGCGGCT GA
 
Protein sequence
MFRRTLTRTT ALVVTAVLAG GLVACSGSAA EVPQDENARL DIWTRRPPGD PSEQVSKDLA 
KAFTKKTGIP TKVTAIFDDF ETKLQQAASQ KDLPDIVIND TAQLGTLVDQ GIVREVDPGE
VSRTKDISDK AWDATKAFDG KHYAVPFSAQ AFALFIRSDW RKAVGAEVPK TWDDLDALAK
KFTKDDPDGN GEDDTYGWVV PGSTKRGYAS WYLSSFLWSS GADYFSGSGT KLAPAIDSPE
AAATLSWFQK SFCDKTVVPG SETAETAAAH PYFDSGTGGM YLTGPYNMAR FDEAVGEGKV
EVVPLPAGPG GEATALAEGE NTYLMAGSAN EAGQLKFAEF AASPAGQKIG MNGDENGSIV
RLPINTTVDM AAERKDERWQ TFNDIYTDAS RYVPTVPDWT PFLQSSAKTF NAVASDCEAD
PESELEALAK DFATELESQR AGG