Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rleg_3752 |
Symbol | |
ID | 8014585 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Rhizobium leguminosarum bv. trifolii WSM1325 |
Kingdom | Bacteria |
Replicon accession | NC_012850 |
Strand | - |
Start bp | 3803164 |
End bp | 3804474 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 644826315 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002977534 |
Protein GI | 241206438 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.561914 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACATTGA GAACTTTTCT GCTGGGCGCC TGCTCAGCAC TGGCGTTTGC CGGTATGGCT TCGGCCGAAA CGCTGACAAT CGCGACCGTG AATAACGGCG ACATGATCCG GATGCAGAAG CTGACGGATG ATTTCAAGGC GAAGAACCCC GGTATCGACC TTGAATGGGT AACCCTGGAA GAAAACGTGC TGCGCCAGAA GGTCACGACC GATATCGCGA CCAAGGGCGG CCAGTACGAC GTTCTGACGA TCGGCACCTA TGAAGTTCCG ATCTGGGCAA AACAGGACTG GTTGCTGCCG CTCGACAATC TCGGCGCCAA TTACGACGTC GACGACTTGC TGCCGGCAAT TCGCAGCGGC CTGACTGTGG ACGGCAAGCT CTATGCTTCG CCGTTCTATG GTGAAAGCTC GATGGTCATG TACCGTAAGG ACCTGTTCGA AGCTGCCGGC CTGAAAATGC CCGACGCGCC GACCTGGGAC TTCGTTGCCG ACGCTGCCCG CAAGATCACC AACAAGGACA AGGAAATCTA CGGCATCTGC CTTCGCGGCA AGGCCGGCTG GGGCGAGAAC ATGGCCTTCT TGACGGCCAT GTCCAATTCC TTCGGCGCAC GCTGGTTTGA CGAGAAGTGG AAGCCGCAGT TCGATCAGCC GGAATGGAAG GACACGCTCG ACTTCTACGT CAAGCTGATG AAGGACGCCG GCCCTCCGGG CGCCTCCTCC AACGGCTTCA ACGAGAACCT GGCGCTCTTC CAGACCGGTA AGTGCGGCAT GTGGATCGAT GCAACGGTTG CCGCTTCCTT CGTCGCCGAT CCGAAGCAGT CGCAGGTCGC CGACAAGGTC GGCTTCGCGC TCGCCCCGGA CAAGGGCCTC GGCAAGCGCG GCAACTGGCT CTGGGCCTGG AGCCTCGCCA TCCCGGCAGG GACCCAGAAG GCCGAAGCTG CTGAGAAGTT CGTTGCCTGG GCAACCAGCA AGGAATACAG CAACCTCGTC GCCGAGAAGG AAGGTTGGCT GAACGCACCT CCGGGCACCC GCAAATCGCT CTATGCGAAT GCGGACTACC AGAAGGCGGC TTCGTTCGCC AAGATGACGC TCGACTCGAT CGAGTCGGCC GATCCGACCA AGCCGACCGT CAAGCCGGTT CCCTATGTCG GCGTCCAGTT CGTGGCGATC CCGGAATTCC AGGGCATCGG CACGGCGGTG GGCCAGCAGT TCTCCGCAGC TCTTGCCGGC CAGCTCTCGG TCGACCAGGC CCTGCAGGCA GCGCAGCAAC TGACCACTCG CGAAATGACC AAGGCCGGCT ACATAAAATA A
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Protein sequence | MTLRTFLLGA CSALAFAGMA SAETLTIATV NNGDMIRMQK LTDDFKAKNP GIDLEWVTLE ENVLRQKVTT DIATKGGQYD VLTIGTYEVP IWAKQDWLLP LDNLGANYDV DDLLPAIRSG LTVDGKLYAS PFYGESSMVM YRKDLFEAAG LKMPDAPTWD FVADAARKIT NKDKEIYGIC LRGKAGWGEN MAFLTAMSNS FGARWFDEKW KPQFDQPEWK DTLDFYVKLM KDAGPPGASS NGFNENLALF QTGKCGMWID ATVAASFVAD PKQSQVADKV GFALAPDKGL GKRGNWLWAW SLAIPAGTQK AEAAEKFVAW ATSKEYSNLV AEKEGWLNAP PGTRKSLYAN ADYQKAASFA KMTLDSIESA DPTKPTVKPV PYVGVQFVAI PEFQGIGTAV GQQFSAALAG QLSVDQALQA AQQLTTREMT KAGYIK
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