Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Ksed_20490 |
Symbol | |
ID | 8373553 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Kytococcus sedentarius DSM 20547 |
Kingdom | Bacteria |
Replicon accession | NC_013169 |
Strand | - |
Start bp | 2126717 |
End bp | 2128027 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 644992298 |
Product | ABC-type sugar transport system, periplasmic component |
Protein accession | YP_003149808 |
Protein GI | 256825848 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 0.0446112 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.538576 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGACGGC GCAGCACACA GGCGCGATGG GCCACCGGCG TGGCACTCGG CGCCCTGGTC GTCACGGGGT GCGGGGGTTC TGAGGAACCC GCCGGCGGGT CGAAGGAGCT GACCTGGTAC ATCAACCCCG ACGGCGGGGG CAACAACCCC AACGGTGGCG GGCAGGCCCA GATCGCACGC CAGTGCTCCG AGGCGTCCAA CGGGGCCTAC ACGATCCGTA CAGAGCTGCT CCCCCGCAGC GCCAGCGACC AGCGCGTGCA GCTCCTGCGC CGCGTCGCCG CCGGTGACCC GGGCGTCGAC ATCATGAGCA TGGACCCGGT CTTCGTGGCC GAGCTCGCGA ACGCCGGGTT CCTCGCGGAC GTGCCGGAGG AGCTCGAGGA CGAGTTCACC GAGGACCGTG TGGAGTCGGC CATCGAGGCC TCCACCTGGC AGGGCGAACT GGTGGCCGTG CCGTTCTGGG CCAACACGCA GGTGCTCTGG TACCGCAAGT CCGTGGCCGA GGCCGCGGGT CTGGACATGA GCAAGCCCGT CACCTGGGAC CAGATCACCG AGGCCGCCGC CAGCCAGGAC AAGACCGTGG GCGTGCAGGC GATGCCCTAC GAGGGCTACG CGGTCTGGAT CAACGCCCTG ATCGCCGGCG CCGGAGGCGA GATCGTGAAG AACCCCGGTG CGAAGGCGGA CGAGACCGAG CTCGGCATCG ACAGCGAGGC CGGGCGCAAG GCCGCCGCCA TCATCGAGAA GATCTCCTCC ACCGGCGTCG GCGGACCGGC CCTGGGCACC ACGGACGAGA CGGTGGCCCT CAACAGCTTC TCCTCGCCGG CCAGCTCCGG GTTCATGGTC AACTGGCCGT ACGTGTGGGC TGCCTTCCCG GCGAACGGGG TGAAGTTCAT CGACGACATC GGGTGGGCGC GCTTCCCGGC CACCGTCGAG GGCGAGGACA GCGCCCCGCC GTTCGGTGGC ATCGAGCTGG GCGTGAACGC CGGCAGCGAC GCCCCGCAGG AGTCCTACGA TGCCATCCGG TGCATCGCCA ACCACGAGCA CCAGACGATG TACATGAAGA ACATCGGCAA CCCGGCCTCG CGCCAGAAGG TGTTCGACGA GCCGGAGATC AAGGAGCAGT TCCCGATGGC GGAGTTGCTG CGCGAGTCGC TGGACGAAGC GGTCCCGCGT CCCCAGAGCC AGTTCTACAG CGACATCTCC ACCGGGCTGC AGCGTTCGTT CAGCCCGCCC GACGAGGTCG GCCCTGACAG CACGCCGAAG CAGGCGCAGG AGTTCATCCT GGCCGTGATC CGAGGGGAGA AGCTGCTGTG A
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Protein sequence | MGRRSTQARW ATGVALGALV VTGCGGSEEP AGGSKELTWY INPDGGGNNP NGGGQAQIAR QCSEASNGAY TIRTELLPRS ASDQRVQLLR RVAAGDPGVD IMSMDPVFVA ELANAGFLAD VPEELEDEFT EDRVESAIEA STWQGELVAV PFWANTQVLW YRKSVAEAAG LDMSKPVTWD QITEAAASQD KTVGVQAMPY EGYAVWINAL IAGAGGEIVK NPGAKADETE LGIDSEAGRK AAAIIEKISS TGVGGPALGT TDETVALNSF SSPASSGFMV NWPYVWAAFP ANGVKFIDDI GWARFPATVE GEDSAPPFGG IELGVNAGSD APQESYDAIR CIANHEHQTM YMKNIGNPAS RQKVFDEPEI KEQFPMAELL RESLDEAVPR PQSQFYSDIS TGLQRSFSPP DEVGPDSTPK QAQEFILAVI RGEKLL
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