More than 300 homologs were found in PanDaTox collection
for query gene Bfae_25450 on replicon NC_013172
Organism: Brachybacterium faecium DSM 4810



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_013172  Bfae_25450  ABC-type sugar transport system, periplasmic component  100 
 
 
430 aa  854    Brachybacterium faecium DSM 4810  Bacteria  normal  0.0772443  n/a   
 
 
-
 
NC_014210  Ndas_3337  extracellular solute-binding protein family 1  42.6 
 
 
427 aa  286  5e-76  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.806542  normal 
 
 
-
 
NC_014165  Tbis_1105  extracellular solute-binding protein family 1  31 
 
 
443 aa  185  1.0000000000000001e-45  Thermobispora bispora DSM 43833  Bacteria  normal  0.698754  normal  0.0706181 
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  33.17 
 
 
422 aa  173  5.999999999999999e-42  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_014210  Ndas_0659  extracellular solute-binding protein family 1  30.9 
 
 
425 aa  161  2e-38  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.579585  normal  0.728331 
 
 
-
 
NC_013093  Amir_0403  extracellular solute-binding protein family 1  33.16 
 
 
426 aa  159  1e-37  Actinosynnema mirum DSM 43827  Bacteria  normal  0.512139  n/a   
 
 
-
 
NC_013131  Caci_7201  extracellular solute-binding protein family 1  29.53 
 
 
447 aa  154  4e-36  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  29.4 
 
 
426 aa  152  8.999999999999999e-36  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_013595  Sros_7725  ABC-type sugar transport system periplasmic component-like protein  30.65 
 
 
420 aa  150  3e-35  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_05710  ABC-type sugar transport system, periplasmic component  31.41 
 
 
425 aa  147  3e-34  Brachybacterium faecium DSM 4810  Bacteria  normal  0.13799  n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  27.84 
 
 
399 aa  144  4e-33  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  27.55 
 
 
424 aa  141  3e-32  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_013595  Sros_2194  ABC-type sugar transport system periplasmic component-like protein  31.99 
 
 
443 aa  137  3.0000000000000003e-31  Streptosporangium roseum DSM 43021  Bacteria  normal  normal 
 
 
-
 
NC_013093  Amir_0446  extracellular solute-binding protein family 1  28.53 
 
 
424 aa  135  9.999999999999999e-31  Actinosynnema mirum DSM 43827  Bacteria  normal  0.900099  n/a   
 
 
-
 
NC_009664  Krad_3730  extracellular solute-binding protein family 1  30.88 
 
 
435 aa  132  1.0000000000000001e-29  Kineococcus radiotolerans SRS30216  Bacteria  normal  0.163607  normal  0.040318 
 
 
-
 
NC_011899  Hore_19770  extracellular solute-binding protein family 1  30.71 
 
 
423 aa  132  1.0000000000000001e-29  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_013174  Jden_0234  extracellular solute-binding protein family 1  30.28 
 
 
412 aa  131  2.0000000000000002e-29  Jonesia denitrificans DSM 20603  Bacteria  normal  0.497123  normal 
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  29.43 
 
 
427 aa  126  6e-28  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  27.7 
 
 
428 aa  126  6e-28  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_011071  Smal_2683  extracellular solute-binding protein family 1  25.34 
 
 
446 aa  124  3e-27  Stenotrophomonas maltophilia R551-3  Bacteria  normal  0.50155  normal 
 
 
-
 
NC_008578  Acel_0552  extracellular solute-binding protein  27.79 
 
 
445 aa  122  9.999999999999999e-27  Acidothermus cellulolyticus 11B  Bacteria  normal  normal  0.764632 
 
 
-
 
NC_008699  Noca_1420  extracellular solute-binding protein  27.07 
 
 
424 aa  121  1.9999999999999998e-26  Nocardioides sp. JS614  Bacteria  normal  0.979516  n/a   
 
 
-
 
NC_002977  MCA1941  sugar ABC transporter, sugar-binding protein, putative  25.99 
 
 
434 aa  120  4.9999999999999996e-26  Methylococcus capsulatus str. Bath  Bacteria  normal  n/a   
 
 
-
 
NC_009972  Haur_0298  extracellular solute-binding protein  26.36 
 
 
486 aa  115  1.0000000000000001e-24  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  29.21 
 
 
430 aa  113  7.000000000000001e-24  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_013131  Caci_7721  extracellular solute-binding protein family 1  26.81 
 
 
462 aa  111  3e-23  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal 
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  26.15 
 
 
411 aa  110  4.0000000000000004e-23  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_013595  Sros_3538  Maltose-binding periplasmic protein/domains- like protein  26.67 
 
 
406 aa  110  6e-23  Streptosporangium roseum DSM 43021  Bacteria  normal  0.385239  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  25.22 
 
 
411 aa  106  1e-21  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_010717  PXO_00880  ABC transporter sugar binding protein  24.51 
 
 
440 aa  105  1e-21  Xanthomonas oryzae pv. oryzae PXO99A  Bacteria  normal  0.106592  n/a   
 
 
-
 
NC_008243  Meso_4520  extracellular solute-binding protein  25.49 
 
 
415 aa  105  2e-21  Chelativorans sp. BNC1  Bacteria  normal  n/a   
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  25.29 
 
 
366 aa  103  4e-21  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_009616  Tmel_0690  extracellular solute-binding protein  25.95 
 
 
402 aa  102  1e-20  Thermosipho melanesiensis BI429  Bacteria  normal  0.678935  n/a   
 
 
-
 
NC_009012  Cthe_1020  extracellular solute-binding protein  24.24 
 
 
459 aa  101  2e-20  Clostridium thermocellum ATCC 27405  Bacteria  unclonable  0.0000000124434  n/a   
 
 
-
 
NC_009486  Tpet_0954  extracellular solute-binding protein  28.95 
 
 
411 aa  98.2  3e-19  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0970  extracellular solute-binding protein  28.95 
 
 
411 aa  98.2  3e-19  Thermotoga sp. RQ2  Bacteria  hitchhiker  0.000309876  n/a   
 
 
-
 
NC_009972  Haur_0890  extracellular solute-binding protein  26.54 
 
 
450 aa  96.3  8e-19  Herpetosiphon aurantiacus ATCC 23779  Bacteria  normal  0.315589  n/a   
 
 
-
 
NC_010577  XfasM23_1550  extracellular solute-binding protein  21.94 
 
 
430 aa  95.9  1e-18  Xylella fastidiosa M23  Bacteria  normal  n/a   
 
 
-
 
NC_013159  Svir_16660  ABC-type sugar transport system, periplasmic component  25.06 
 
 
406 aa  95.9  1e-18  Saccharomonospora viridis DSM 43017  Bacteria  normal  0.613471  normal 
 
 
-
 
NC_010513  Xfasm12_1607  ABC transporter sugar-binding protein  21.94 
 
 
430 aa  95.9  1e-18  Xylella fastidiosa M12  Bacteria  normal  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  27.05 
 
 
421 aa  95.5  2e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_012669  Bcav_2603  extracellular solute-binding protein family 1  27.01 
 
 
445 aa  93.6  6e-18  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.0144502  normal 
 
 
-
 
NC_013530  Xcel_1045  extracellular solute-binding protein family 1  26.91 
 
 
488 aa  92.4  1e-17  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  0.0733801  n/a   
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  25.19 
 
 
414 aa  92.4  1e-17  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_007952  Bxe_B0420  ABC sugar transporter, periplasmic ligand binding protein  23.13 
 
 
410 aa  91.7  2e-17  Burkholderia xenovorans LB400  Bacteria  normal  normal 
 
 
-
 
NC_008048  Sala_1023  extracellular solute-binding protein  24.07 
 
 
422 aa  91.3  3e-17  Sphingopyxis alaskensis RB2256  Bacteria  normal  0.705733  normal 
 
 
-
 
NC_013202  Hmuk_0944  extracellular solute-binding protein family 1  23.39 
 
 
433 aa  90.9  4e-17  Halomicrobium mukohataei DSM 12286  Archaea  normal  normal  0.322748 
 
 
-
 
NC_010003  Pmob_1492  extracellular solute-binding protein  24.62 
 
 
421 aa  90.1  6e-17  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_014211  Ndas_5074  extracellular solute-binding protein family 1  25.45 
 
 
447 aa  90.1  7e-17  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  normal 
 
 
-
 
NC_014151  Cfla_0501  extracellular solute-binding protein family 1  27.05 
 
 
433 aa  87  6e-16  Cellulomonas flavigena DSM 20109  Bacteria  decreased coverage  0.0000488029  hitchhiker  0.0000184856 
 
 
-
 
NC_010676  Bphyt_7208  extracellular solute-binding protein family 1  25.51 
 
 
410 aa  87  6e-16  Burkholderia phytofirmans PsJN  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  23.32 
 
 
466 aa  86.7  7e-16  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  26.93 
 
 
427 aa  86.7  7e-16  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  29.15 
 
 
433 aa  86.7  7e-16  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_009616  Tmel_1820  extracellular solute-binding protein  27.85 
 
 
411 aa  85.9  0.000000000000001  Thermosipho melanesiensis BI429  Bacteria  normal  0.148067  n/a   
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  22.54 
 
 
429 aa  85.9  0.000000000000001  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_011899  Hore_23010  extracellular solute-binding protein family 1  24.53 
 
 
436 aa  85.1  0.000000000000002  Halothermothrix orenii H 168  Bacteria  hitchhiker  0.00000978171  n/a   
 
 
-
 
NC_013526  Tter_2703  extracellular solute-binding protein family 1  23.3 
 
 
450 aa  85.1  0.000000000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.0000000263225  n/a   
 
 
-
 
NC_013595  Sros_2364  ABC-type sugar transport system periplasmic component-like protein  26.09 
 
 
416 aa  84.7  0.000000000000003  Streptosporangium roseum DSM 43021  Bacteria  normal  0.128582  normal 
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  27.3 
 
 
419 aa  83.6  0.000000000000007  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_007644  Moth_1484  extracellular solute-binding protein  24 
 
 
444 aa  83.2  0.000000000000008  Moorella thermoacetica ATCC 39073  Bacteria  unclonable  0.00000000000980441  normal 
 
 
-
 
NC_013946  Mrub_0045  extracellular solute-binding protein family 1  26.46 
 
 
414 aa  82.8  0.00000000000001  Meiothermus ruber DSM 1279  Bacteria  normal  0.713374  normal 
 
 
-
 
NC_011899  Hore_00780  extracellular solute-binding protein family 1  20.87 
 
 
411 aa  82.4  0.00000000000001  Halothermothrix orenii H 168  Bacteria  normal  0.0480859  n/a   
 
 
-
 
NC_014165  Tbis_1886  extracellular solute-binding protein family 1  26.26 
 
 
435 aa  82.4  0.00000000000001  Thermobispora bispora DSM 43833  Bacteria  normal  normal  0.23125 
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  25.12 
 
 
428 aa  82.4  0.00000000000001  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4557  extracellular solute-binding protein  23.47 
 
 
412 aa  81.6  0.00000000000002  Sinorhizobium medicae WSM419  Bacteria  normal  0.302395  normal 
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  24.94 
 
 
426 aa  81.3  0.00000000000003  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_010623  Bphy_4057  extracellular solute-binding protein  24.18 
 
 
410 aa  81.3  0.00000000000003  Burkholderia phymatum STM815  Bacteria  normal  normal 
 
 
-
 
NC_013174  Jden_0513  extracellular solute-binding protein family 1  27.89 
 
 
447 aa  81.6  0.00000000000003  Jonesia denitrificans DSM 20603  Bacteria  decreased coverage  0.000000038068  hitchhiker  0.000703825 
 
 
-
 
NC_008148  Rxyl_1991  extracellular solute-binding protein  23.29 
 
 
455 aa  80.9  0.00000000000004  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  0.603432  n/a   
 
 
-
 
NC_009718  Fnod_0450  extracellular solute-binding protein  26.41 
 
 
414 aa  80.9  0.00000000000004  Fervidobacterium nodosum Rt17-B1  Bacteria  normal  0.308403  n/a   
 
 
-
 
NC_010816  BLD_0922  MalE-type ABC sugar transport system periplasmic component  24.71 
 
 
447 aa  80.5  0.00000000000005  Bifidobacterium longum DJO10A  Bacteria  normal  0.755265  n/a   
 
 
-
 
NC_013161  Cyan8802_4213  extracellular solute-binding protein family 1  22.54 
 
 
426 aa  80.5  0.00000000000005  Cyanothece sp. PCC 8802  Bacteria  normal  0.215316  normal 
 
 
-
 
NC_011726  PCC8801_4174  extracellular solute-binding protein family 1  22.54 
 
 
426 aa  80.5  0.00000000000005  Cyanothece sp. PCC 8801  Bacteria  n/a    n/a   
 
 
-
 
NC_011370  Rleg2_6090  extracellular solute-binding protein family 1  23.53 
 
 
425 aa  80.1  0.00000000000006  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_012669  Bcav_3775  extracellular solute-binding protein family 1  25.5 
 
 
459 aa  79  0.0000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.137854  normal 
 
 
-
 
NC_008148  Rxyl_0062  extracellular solute-binding protein  24.5 
 
 
436 aa  78.2  0.0000000000002  Rubrobacter xylanophilus DSM 9941  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  24.84 
 
 
431 aa  79  0.0000000000002  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  25.33 
 
 
453 aa  77.8  0.0000000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_012669  Bcav_3982  extracellular solute-binding protein family 1  25.76 
 
 
435 aa  77.8  0.0000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.71759  normal 
 
 
-
 
NC_014212  Mesil_2466  extracellular solute-binding protein family 1  27.7 
 
 
415 aa  77.4  0.0000000000004  Meiothermus silvanus DSM 9946  Bacteria  normal  normal  0.0930087 
 
 
-
 
NC_012793  GWCH70_1392  extracellular solute-binding protein family 1  24.49 
 
 
445 aa  77.4  0.0000000000005  Geobacillus sp. WCH70  Bacteria  normal  n/a   
 
 
-
 
NC_010483  TRQ2_0116  extracellular solute-binding protein  24.44 
 
 
420 aa  77  0.0000000000006  Thermotoga sp. RQ2  Bacteria  normal  n/a   
 
 
-
 
NC_013525  Tter_0183  extracellular solute-binding protein family 1  25.36 
 
 
429 aa  76.6  0.0000000000008  Thermobaculum terrenum ATCC BAA-798  Bacteria  n/a    n/a   
 
 
-
 
NC_009486  Tpet_0118  extracellular solute-binding protein  24.44 
 
 
420 aa  76.6  0.0000000000008  Thermotoga petrophila RKU-1  Bacteria  normal  n/a   
 
 
-
 
NC_007604  Synpcc7942_2417  transcriptional regulator, ABC transporter  24.11 
 
 
421 aa  75.9  0.000000000001  Synechococcus elongatus PCC 7942  Bacteria  normal  normal  0.0335393 
 
 
-
 
NC_013526  Tter_2659  extracellular solute-binding protein family 1  25.68 
 
 
495 aa  76.3  0.000000000001  Thermobaculum terrenum ATCC BAA-798  Bacteria  normal  0.0361435  n/a   
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  24.16 
 
 
430 aa  76.3  0.000000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_009718  Fnod_0781  extracellular solute-binding protein  24.38 
 
 
395 aa  76.3  0.000000000001  Fervidobacterium nodosum Rt17-B1  Bacteria  unclonable  0.000000000729506  n/a   
 
 
-
 
NC_007802  Jann_3553  extracellular solute-binding protein  26.14 
 
 
419 aa  75.1  0.000000000002  Jannaschia sp. CCS1  Bacteria  normal  normal 
 
 
-
 
NC_012850  Rleg_3910  extracellular solute-binding protein family 1  23.15 
 
 
412 aa  75.5  0.000000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal  0.198843 
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  25.23 
 
 
421 aa  75.5  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_013093  Amir_0348  extracellular solute-binding protein family 1  23.2 
 
 
419 aa  74.7  0.000000000003  Actinosynnema mirum DSM 43827  Bacteria  normal  n/a   
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  25.28 
 
 
410 aa  74.7  0.000000000003  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  23.48 
 
 
439 aa  74.3  0.000000000004  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  29.91 
 
 
433 aa  74.3  0.000000000004  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_012669  Bcav_0572  extracellular solute-binding protein family 1  27.78 
 
 
470 aa  73.9  0.000000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_011884  Cyan7425_2553  extracellular solute-binding protein family 1  21.5 
 
 
432 aa  73.9  0.000000000006  Cyanothece sp. PCC 7425  Bacteria  normal  0.964139  normal 
 
 
-
 
NC_011369  Rleg2_3121  extracellular solute-binding protein family 1  29.1 
 
 
412 aa  73.6  0.000000000007  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  normal  normal 
 
 
-
 
NC_007413  Ava_3685  extracellular solute-binding protein  21.11 
 
 
432 aa  73.6  0.000000000007  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
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