| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | CPR_0904 |
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| Symbol | |
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| ID | 4204386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Clostridium perfringens SM101 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008262 |
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| Strand | + |
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| Start bp | 1036071 |
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| End bp | 1037390 |
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| Gene Length | 1320 bp |
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| Protein Length | 439 aa |
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| Translation table | 11 |
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| GC content | 30% |
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| IMG OID | 642565462 |
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| Product | ABC transporter, periplasmic substrate-binding protein, putative |
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| Protein accession | YP_698228 |
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| Protein GI | 110801770 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.00221898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAAGAAAT TTTATGGTTT TGTTTTACTA ATATTTTGTT TTAATCTTTT TGGATGTTCT
TTTAGAAATA CAGAAGTATC AAATAAAAAT ATTCAAGGAT ATGACAAAGG CGAGGAGCTT
ATAACAATGT GGGTTCATGT TATAGAAGAA ACTTCAGAAG GACAAGCTTA TAAAAATTCA
GTAGAAAGGT TTAATAAAGA ATACAATGGT AAGTATTGTT TAAGTGTTGA ATTTGTACCT
CGTAATGAAA GTGGAGGAGG ATATACTGAT AAAATAAATT CATCAGTAAT TTCTGGAGGA
CTTCCAGACA TAATAACTGT TGATGGGCCC AATGTATCAG CTTATGTTGC AAACAACATA
ATTCAGCCTT TAGTAGGTAT AACTGATGAT GAAAAGGCTA AATATTTACC GTCAGTAATA
GAGCAAGGAA CAATAAACAA TAAATTATAT GCATTAGGTC TAATGGAATC TAGTACGTTA
TTTTATTATA ACAAAGATAT ATTAAACGAA GTAGGAATAC AAGTACCATC ATTTGATAAT
CCATGGACTT GGGACGAATT AAATAAGGTC TGTGAAAAAG TTAAGAACTA TTTAGATAAA
AAAAATGGAT ATCCAATAGA TATGTCATTC CCAGCAGGGG AAACAACTAT TTATTTTTAT
GCACCATTTA TATGGTCAAA TGGTGGAGAT TTTGTAAGCT CTGATGGTTT AAAGGTTAAT
GGAGTATTTA ATTCTGAAAA GAATGTAGAA ACTATTAGTT ATTTTAAAGA AATTACAGAC
AAAGGATATA TACCTAAATA TACAATAAGT GATTTATTTG AAAAGGGAAG GGCTGCATTT
AAATTTGATG GAGCATGGGC TATTACAAAT ATAAGAAATA ACTATCCAGC TTTTAATTTA
GGAATAGCAC CATATCCAGT GGGAAATGAT TGGAATGGAG AAAAGTATAC ACCAACAGGA
GGATGGGCTT TTGCAACAAC TACAACTTGT AAAAACCCTG AGGCTGCAAA AGAAGCAATC
AAGTTTTTAA CTAATGCAGA AAGTGGCATA GATATGTATA ACTTAACAGG TAATTTACCA
TCTACATTTG AAGCTTATGA AAATATTGAT GCATTTAAAA CTGATGAATT ATTTAAAACA
GCATATTATC AGCTTGTTAA CTATGGTCAT CCAAGACCAA AATCACCAGC TTATCCTCAG
ATAAGTACAT CATATCAGCA GGCTATTGAA GGTGTACTAT TAAATGATGA AACACCAGAA
GAATCGTTAT ATAAAACAAT GAGAAGAATA GAAGATAAGT TAATACGTTA TCAAGATTAA
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| Protein sequence | MKKFYGFVLL IFCFNLFGCS FRNTEVSNKN IQGYDKGEEL ITMWVHVIEE TSEGQAYKNS
VERFNKEYNG KYCLSVEFVP RNESGGGYTD KINSSVISGG LPDIITVDGP NVSAYVANNI
IQPLVGITDD EKAKYLPSVI EQGTINNKLY ALGLMESSTL FYYNKDILNE VGIQVPSFDN
PWTWDELNKV CEKVKNYLDK KNGYPIDMSF PAGETTIYFY APFIWSNGGD FVSSDGLKVN
GVFNSEKNVE TISYFKEITD KGYIPKYTIS DLFEKGRAAF KFDGAWAITN IRNNYPAFNL
GIAPYPVGND WNGEKYTPTG GWAFATTTTC KNPEAAKEAI KFLTNAESGI DMYNLTGNLP
STFEAYENID AFKTDELFKT AYYQLVNYGH PRPKSPAYPQ ISTSYQQAIE GVLLNDETPE
ESLYKTMRRI EDKLIRYQD
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