Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0572 |
Symbol | |
ID | 7861035 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | - |
Start bp | 633255 |
End bp | 634667 |
Gene Length | 1413 bp |
Protein Length | 470 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 643864652 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002880597 |
Protein GI | 229819071 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCGCAACG ATCCGACCGG TCTCGCCCGG TGGGGCGCGC TCGGCGTCGC GGCGGCGCTG GTCCTCGCCG GATGCGGCGC GGGCGGCGGC GACGCCGGCG GCGGCGGCGA CGACACCGGT GCCGAGCTCG AAGCCTCCGC CGAGGACTTC CTCGCTGGAC GTGGCGAGGA GCTCGGCGTC GGCAGCATCA GCGTTCTCGC TCAGAGCTCA CCTCAGGCCG ACGCGATCCA GCAGATCAGC GGACAGTTCA CCGAGCTCAC CGGGATCACC GTCGACTGGA CGATCCTCGA CGAGCAGTCC ACCGAGAACC GCGCGGCAGT GGCACTCGGT TCGGGTGACG GCGGGTACGA CGTCCTGCAG ACGCCGTCCG GCTTCATCCC GACGTACGTG GACCGCGGCT GGCTCGAGCC GATCGGGCCG CTCGTCGACG ACGCGGAGAG CATCGTCCCC GGATGGGACC TCGCGGCGTT CGGCGAGGGG ACGACGTCGC TGCTGAGCCG GGAGGACGAG CTGTACGGCG TCCCGATGTT CATCGGGACC CAGATGTTCT ACTACCGCAC CGACGTGTTC GCCGAGCACG GCATCGACGC GGTGCCGACG ACGTACGAGG AGCTCGTCGA CGTCGTCCAC CAGATCCACT CCGACGATGT CGCCGGCATC GCGCTGCGGA CGGCCCCGAG CCCGTCGCAG CTGCTGTTCG TCTGGTCGGC GTGGCTCTAC GCCAACGGCG GCAGCTACTA CGAGACGTTC GACGACGGCA CGTACTCGGG ATCTGCCCTG GACTCCCCGG AGGCCGTCGA GTCGCTCACG ACGTACACCG ACCTCGTGCA GAACTACGCG CCGTCCGGAG CGACGAACTG GAGCGTCGAC GACGTCACGC GCGCCTTCGC CAGCGGGCGG GTCGCGATCG TCCAGGAGGG TGCCGTGTTC GGCGGCACCT TCAACAACCC GGAGGCCTCG CAGGTCGCGG GGAACATCGA CTCGTTCACG CTGCCGGAGG GTCCCGCCGG CTCGTACGTG CCGTACAACA CGCACGGGTG GACCATCGCG GCGAACAGCG ATGCGACGGA CGCGGCGTGG CTCTTCACGC AGTGGGCGAC TCTCGCGCAG ACGCTCACGG CGGCGACACA GACGGACGCC AACTTCGGGG CGCCGCCTCT CGCGGAGGTG TACGAGTCGC CGGAGTACGA GGAGAGCTAC GGGTTCGGGA GCTTCGTCCC GACCGTCACC GGCACGATCG GGATCGCGAA CGACGGCGGC GTCTCACCGT TCGAGGACGA TCCGAACTAC CTGCCGGCGA CACCGGACTG GGCGACCGTC GGTCAGCAGA TCGCCGAGGA GCTGAGCAAG GCGGTGACGG GCCAGGTCGA GGTCGCCGAA GCCATCCGGG CCGCCGCCGC GTACCTCGAG TGA
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Protein sequence | MRNDPTGLAR WGALGVAAAL VLAGCGAGGG DAGGGGDDTG AELEASAEDF LAGRGEELGV GSISVLAQSS PQADAIQQIS GQFTELTGIT VDWTILDEQS TENRAAVALG SGDGGYDVLQ TPSGFIPTYV DRGWLEPIGP LVDDAESIVP GWDLAAFGEG TTSLLSREDE LYGVPMFIGT QMFYYRTDVF AEHGIDAVPT TYEELVDVVH QIHSDDVAGI ALRTAPSPSQ LLFVWSAWLY ANGGSYYETF DDGTYSGSAL DSPEAVESLT TYTDLVQNYA PSGATNWSVD DVTRAFASGR VAIVQEGAVF GGTFNNPEAS QVAGNIDSFT LPEGPAGSYV PYNTHGWTIA ANSDATDAAW LFTQWATLAQ TLTAATQTDA NFGAPPLAEV YESPEYEESY GFGSFVPTVT GTIGIANDGG VSPFEDDPNY LPATPDWATV GQQIAEELSK AVTGQVEVAE AIRAAAAYLE
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