| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Ndas_0659 |
|---|
| Symbol | |
|---|
| ID | 9244501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_014210 |
|---|
| Strand | - |
|---|
| Start bp | 807245 |
|---|
| End bp | 808522 |
|---|
| Gene Length | 1278 bp |
|---|
| Protein Length | 425 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003678610 |
|---|
| Protein GI | 297559636 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 13 |
|---|
| Plasmid unclonability p-value | 0.579585 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 0.728331 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGTTCC CCAAGATCGC CGCGGCCACG GCCGTGGTCC TGCTCGCCTC CGCGTGCGGC
GGCTCCGACT CCGGTGACGG GGGCGGCGAG GCCGACAGCC TGACCGTCTG GGTCATGGGC
ACCTCCCAGG AGCCCCTCGT CGAGTACTTC GAGGACGTCG AGGCGCGCTT CCAGGAGAGC
AACCCGGACG TGGCCGTCAA CGTCGAGTTC ATCCCCTGGC CCGACGCGCA GGAGGCCATC
ACCAACGCCC TCGCCGGCGG TGACGCCCCC GACGTGCTGG AGGTCGGCAA CGACCAGGTC
GCGGGCTGGG CCGCGCAGGG CGCCCTGATG GACATCACCG AGCAGGTCGA CGGCTGGGAC
GCCGCCGCGG GCATCGACGA GAACGCCCTG GAGTACGGCA CCTACGAGGG CGTCCAGTAC
GGCGTCCCGT GGTTCTCGGG CGTGCGCACC CTGTACTACC GCGCGGACTG GCTGGAGGAG
ATCGGCCACG AGCCGCCGAC GACCTGGGAC GAGCTCGTCG AGGTGGCCGA GGCCATCGAG
GAGGAGTACG ACGTCCCCGG CTTCGCCGCG CCGACCGACT TCACCAACGG CATCGCCAGC
TTCATCTGGA GCAACGGCGG CTCGATCGCG GAGCAGAACG GCGAGGAGTG GGAGGGCACC
CTCACCGACC CCGCCACCGT CGAGGCGATC GAGTTCTACT CCAGCCTGAC CACCGACGGC
ATCTCGCCGC AGGACTACGT CGGCCAGAAC GAGCTCATCG CGCTGGCCGA CATGGCCAAC
AGCCAGCTGG GCATGTACAT CGACGGCGGC TGGGCGATCG GCTCCATGGA GGAGCAGGCC
GAGGACCCGG CGGTCATCGA GAACATCGTC GCCGCGCCCA TCCCCGGCGC CGAGGGCATC
GCCCCGGCCT TCGCGGGCGG TTCCGCCCTG ACGGTGTTCA CCACCACCGA GCACCCGGAC
CTGGCCTTCG AGCTGCTCAC CGTCCTCGGT GACGAGGAGG GCGGCCAGGG CTACGCCGAC
GTCGCGGGCT TCTTCCCGGC CTACCCGCAC CTGCTGGAGA GCGAGACGTA CCAGGAGGAC
CCCGCCACCG CCGCTGCCGC CGAGCAGATG CAGCACACCC AGTTCTTCCC GACCACCCCG
CGCTGGACCG CGGCCGACCA GGACAACAAG ATCCTGCCGG GCGCCGTCCT GGAGATCGTG
CAGGGAGGCG ACGCCGAGGA GGTCCTGGCG GCGGCCAACG AGGAGCTGAC CTCGATCCTC
AACGAGCCGG TCGAGTAG
|
|---|
| Protein sequence | MRFPKIAAAT AVVLLASACG GSDSGDGGGE ADSLTVWVMG TSQEPLVEYF EDVEARFQES
NPDVAVNVEF IPWPDAQEAI TNALAGGDAP DVLEVGNDQV AGWAAQGALM DITEQVDGWD
AAAGIDENAL EYGTYEGVQY GVPWFSGVRT LYYRADWLEE IGHEPPTTWD ELVEVAEAIE
EEYDVPGFAA PTDFTNGIAS FIWSNGGSIA EQNGEEWEGT LTDPATVEAI EFYSSLTTDG
ISPQDYVGQN ELIALADMAN SQLGMYIDGG WAIGSMEEQA EDPAVIENIV AAPIPGAEGI
APAFAGGSAL TVFTTTEHPD LAFELLTVLG DEEGGQGYAD VAGFFPAYPH LLESETYQED
PATAAAAEQM QHTQFFPTTP RWTAADQDNK ILPGAVLEIV QGGDAEEVLA AANEELTSIL
NEPVE
|
|---|
| |