| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_7721 |
|---|
| Symbol | |
|---|
| ID | 8339097 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Catenulispora acidiphila DSM 44928 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013131 |
|---|
| Strand | - |
|---|
| Start bp | 8959101 |
|---|
| End bp | 8960489 |
|---|
| Gene Length | 1389 bp |
|---|
| Protein Length | 462 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 69% |
|---|
| IMG OID | 644960805 |
|---|
| Product | extracellular solute-binding protein family 1 |
|---|
| Protein accession | YP_003118386 |
|---|
| Protein GI | 256396822 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 32 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGGCGCA AGCTCATAGC CCTGTCGTCG GCGGCCGTGG CCGTGGCGCT CATGGCTTCC
GCGTGCAGCT CGTCGAAGTC CAGCGGGTCC GACGCGGCCG GCAGCGGCGG CACCACGGCC
GCTCCCTCGT CGAACCAGCT CGGCACCGGC GGCACCGGGT CCACCGGTTC GGCGATCACG
ACGGACGGCA AGGGCAAGAC GGTCAACATC TGGCTGATGC AGGACGCGCA GAAGGGCTGG
CAGAACGTCG TCGACCAGGC CAACCAGCGC TTCACCGCGG AGACCGGCGC GCAGGTCAAG
ATCAACTGGC AGACCTGGAC CAACTACGGC CAGACCGTGG ACGCCGCCAT CGGCTCCTCC
TCGGCTCCGG ACGCCATCGA GCTGGGCAAC ACCCAGACCG CCAAGTACAT CGGCGCCGAC
CAGCTGGTCG ACCTCACCGG CGACAAGTCG AAGTTCGACA ACTCCGGCGC CTGGCTGGAC
AGCCTCGCGG CCTCCGGCGC CTCGCCGGAC GGCAGCAAGC AGTACGCGAT CCCCTACTAC
GCCGGCTCCC GCGTCCTGAT CTACCGCAAG GACCTGTGGG CCGCGGCGGG CGTGACCACC
GCGCCGACCA CGCTCGACGA GCTCAAGGCG GACCTGGACA AGGTCAAGGC GGCCAACACC
TCCACCGCCA ACTTCTCGGC GCTCTACCTG CCGGGCCAGA ACTGGTACAC CGCCATCTCC
TTCGGCGCCG GCAGCTACGG CGTCAACGGC GTCATCGCCA AGTCCAACGG CAGCAGCTGG
ACCGGCACGA TGACCGACCC GAAGTTCCTG ACGGGCATCT CGACGTGGGA CAGCCTGCAG
AAGAGCTACT CGGTCGGCGG CGCGACCAAG GACGAGACCG ACCAGGACGC GCTGATGGCC
AAGGGCAACA TCTCGGCCAT CATCGGCAAC GGCTGGGAGG CCGCGCAGGT CTACGACCCC
AAGGTCGGCG ACCCGACGCT GAAGGACAAG CTCGCTGAGA TCGCCGTCCC CGGCGTGACC
GCGGACGCCC CGACCCCGGC CTTCCTGGGC GGCTCGAACC TGGCGGTCCC GTCGAAGGCG
GCGAACTCCA AGCTCGGCGA GGAGTGGATC CGGATCTTCA CCGACACCGC CAGCATGAAG
CTGCTGGCGG CCAAGGCGAT CCCGAACAAC AAGACCCAGA TCGCCGACTA CATCGCCGCC
GACCCGGCCA ACCAGGCCAC CGGCGACGCG GCCAAGGGCG TCACCTGGTT CATCCCGAAC
TCGCCGAACT GGGCGCCGGC GGACGAGACG CAGCTGAAGA CCGCGTTCGG CCAGATCGCC
TCCGGGCAGG ACCCGGCGAC CGTGCTCAAG GGATTGCAGG ACAGCATCCT GAAGGACCTG
AACAGCTGA
|
|---|
| Protein sequence | MRRKLIALSS AAVAVALMAS ACSSSKSSGS DAAGSGGTTA APSSNQLGTG GTGSTGSAIT
TDGKGKTVNI WLMQDAQKGW QNVVDQANQR FTAETGAQVK INWQTWTNYG QTVDAAIGSS
SAPDAIELGN TQTAKYIGAD QLVDLTGDKS KFDNSGAWLD SLAASGASPD GSKQYAIPYY
AGSRVLIYRK DLWAAAGVTT APTTLDELKA DLDKVKAANT STANFSALYL PGQNWYTAIS
FGAGSYGVNG VIAKSNGSSW TGTMTDPKFL TGISTWDSLQ KSYSVGGATK DETDQDALMA
KGNISAIIGN GWEAAQVYDP KVGDPTLKDK LAEIAVPGVT ADAPTPAFLG GSNLAVPSKA
ANSKLGEEWI RIFTDTASMK LLAAKAIPNN KTQIADYIAA DPANQATGDA AKGVTWFIPN
SPNWAPADET QLKTAFGQIA SGQDPATVLK GLQDSILKDL NS
|
|---|
| |