Gene Sros_9091 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSros_9091 
Symbol 
ID8672437 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStreptosporangium roseum DSM 43021 
KingdomBacteria 
Replicon accessionNC_013595 
Strand
Start bp10028658 
End bp10029926 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content71% 
IMG OID 
ProductABC-type sugar transport system periplasmic component-like protein 
Protein accessionYP_003344457 
Protein GI271970261 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.306335 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGGTACC GCCTCCATGC CACCGCGGCA GTGCTGACGC TCGCCGCCTG CCTCACCGCG 
TGCGGCTCCT CCGAGCCCTC CGCCTCCACC GGCACCGGCC GGAGCTCCAC CGGCCTGACC
GTGTGGATCA TGAGGGACAG CTTCTCCGAC GCGGTTCTCG ACCGCTTCCG CACCGGTTTC
CGGGCCTCCC ACCCCGGCAC CACCCTCGAC ATCCAGATCC AGGAGTGGGA CGGCATCGGC
CAGAAGGTGA CCAGCGCCCT GGCCAGCAAC GACGCCCCGG ACGTCATCGA GGTCGGGAAC
ACCCAGGTCG CCGAGTACGC CGCCAGCGGC GGGGTGAAGG ACCTCACCGA CAAGGTGGCC
GACCTCGGCG GCGGCGACTG GCTGCCCGGA CTGGCCGAAC CCGGCAAGGT CGACGGACGC
CAGTACGGCA TCCCCTGGTA CGCCGCCAAC CGCGTCGTCA TCTACAACAA GGACCTGTTC
GCCAAGGCCG GGATCACCGC TCCGCCCAGG ACCCGGCAGG AGTGGCTGGA GGTCACGGCC
AAGCTCGACA AGGGCGGCGA CCAGGGCATC TACCTGCCCG GACAGAACTG GTACACCCTC
GCGGGGTTCA TCTGGGACGA GGGAGGCGAC CTCGCGGTCA ACCAGGGTGG CACCTGGAAG
GGCGGGCTGG GCACTCCCCA GGCACTGGCC GGCGTCCGGT TCTACGCGTC CTTGCAGGCG
CTGGGCGAGG GTCCCAAGGA CTCCGACGAG GCCAGGCCGC CGCAGTTCGA CGTCTTCGCC
AAGGGCGACG TCGCCCAGCT CATCGCCGCG CCCGGCGGCG CGACCGCCAT CGAGAAGGCC
AACCCGGAGC TGAAGGGCAA GCTCGGTTTC TTCCCGATCC CCGGCAAGTC CGCCGACCGG
CCGGGCGCGG TGTTCACCGG CGGCTCCGAC CTGATCATCC CGGAGGCCTC GAAGAACCAG
GAGGCGGCCT ACGAGGTCGT CAAGGCGCTG ACCGGCGAGA GGTTCCAGAC CGACATGGCC
AGGGAGATGC GCTACGTGCC CAACCGGGTC TCCTTCGCGG GCGTCCTGGA CGGCGACGAG
GCGGCCGCCG CGATGGCCGC GGGCGCCGCC AACGGGCACG CCACCCCCAA CTCCCCCAAC
TGGGCCGCGG TCGAGGCCAA GAACCTGATC AAGGAGTACC TCACGAAGGT GCTCACCGGC
GGCGACCCCG CCGTCGAGGC GGGCAAGGCC GACCAGAGCA TCGCCGAGAT CCTGAACACC
ACGTCCTGA
 
Protein sequence
MGYRLHATAA VLTLAACLTA CGSSEPSAST GTGRSSTGLT VWIMRDSFSD AVLDRFRTGF 
RASHPGTTLD IQIQEWDGIG QKVTSALASN DAPDVIEVGN TQVAEYAASG GVKDLTDKVA
DLGGGDWLPG LAEPGKVDGR QYGIPWYAAN RVVIYNKDLF AKAGITAPPR TRQEWLEVTA
KLDKGGDQGI YLPGQNWYTL AGFIWDEGGD LAVNQGGTWK GGLGTPQALA GVRFYASLQA
LGEGPKDSDE ARPPQFDVFA KGDVAQLIAA PGGATAIEKA NPELKGKLGF FPIPGKSADR
PGAVFTGGSD LIIPEASKNQ EAAYEVVKAL TGERFQTDMA REMRYVPNRV SFAGVLDGDE
AAAAMAAGAA NGHATPNSPN WAAVEAKNLI KEYLTKVLTG GDPAVEAGKA DQSIAEILNT
TS