| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1023 |
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| Symbol | |
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| ID | 4082306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1056342 |
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| End bp | 1057610 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638009383 |
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| Product | extracellular solute-binding protein |
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| Protein accession | YP_616073 |
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| Protein GI | 103486512 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.705733 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGATTGA CCCGGCGCCA ATTGACAGGC GCACTCGCGG CGCTGCCCCT GCTCCCCATG
CTCGGCGGCT GCGAGGAGCG GCACGCCGAC ACGCTGACCA TCTGGGCGAT GGGCAATGAA
GGAGCGAGCC TCCCCGCCCT TCTCAACAGG CTTGCGTTGC CCGCGGACCT GCCACCGGTC
GACGTGCAGC CACTGCCGTG GAGCGCAGCG CACGAAAAAC TGCTCACCGG CTTCGCGGGC
GGCTCGCTGC CCACGATCGG CCAGGTCGGC AACAGCTGGA TCGCCGAGAT GGCGGCGATC
GGCGCGATTG CTCCCCTGCC CGCTTCCGCC ACCACGCTGC TCGACGATCA GTTCGCCGCG
GTCGTTGAAA CCAACCGGAT CGGCGGCACC GCCTGGGCCG TGCCCTGGTA TGTCGACACG
CGGCTGCAAT TTTACCGCAA GGACATGTTC GCGCGTGCGG GTTATGCCGC GCCGCCGCTC
GCATGGGCCG AATGGAAGCG CGCGCTGCAC CGCGTCAAGG CGCTCGCCGG ACCCGGCAAT
TACGCCGTGC TGCTGCCGCT CAATGAGTTC GAGCAACTGC TGACCATCGC GCTGTCGGCG
AGTGCGCGCC TGCTGCGCGA CAAGGGGGCG CGCGGCGCCT TTTCCGACCC CGAGTTCAAG
GCTGCGCTCG CCTTCTATAA ATCGCTGTTC GACGAGCGGC TCGCGCCGAT CGCATCGGCG
ACGCAGATTT CGAACATCTG GACCGAATTC GCCAAAGGCT ATTTCAGCAT TTTTACGTCG
GGCCCATGGA CGATAGGTGA CATGAAAAGC CGCCTCGATC CCGCCATGCA GGACAAATGG
GCGACCGCGC CCAATCCCGG TCCCGGCGGC ATCGGTTCGG CGGCGCCGGG CGGGTCGAGC
CTCGTCGTTT TCGCCAGCCA GGCGGACAGC GCCGCCGCAT GGGATATCGT CGCGCGCCTG
CTCGCGCCCA CCGCACAGCT CGCGTTTCAC CGGCTGACCG GCAATCTGCC CGCGCGGCGT
TCGGTCTGGC GCGCCGCTGG CCTCGCGAGC GACCCCATCG TCGCCCCCTT CGCCACCCAG
CTCGACCATG CGACCGCGTT GCCCAAAGTG CCCGAATGGG AACGCATCGT CACCGAAATG
CAGGTGGTCG CCGAGCGCAT GGTGCGCGGC CACTATAGCG TCGATGCCGC CGCGCACGAG
ATCGACCGCC GCGCCGACCG CCTGCTCGAA AAAAGGCGCT GGATGCTCGA CAGGGGGCGC
GCCCTGTGA
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| Protein sequence | MRLTRRQLTG ALAALPLLPM LGGCEERHAD TLTIWAMGNE GASLPALLNR LALPADLPPV
DVQPLPWSAA HEKLLTGFAG GSLPTIGQVG NSWIAEMAAI GAIAPLPASA TTLLDDQFAA
VVETNRIGGT AWAVPWYVDT RLQFYRKDMF ARAGYAAPPL AWAEWKRALH RVKALAGPGN
YAVLLPLNEF EQLLTIALSA SARLLRDKGA RGAFSDPEFK AALAFYKSLF DERLAPIASA
TQISNIWTEF AKGYFSIFTS GPWTIGDMKS RLDPAMQDKW ATAPNPGPGG IGSAAPGGSS
LVVFASQADS AAAWDIVARL LAPTAQLAFH RLTGNLPARR SVWRAAGLAS DPIVAPFATQ
LDHATALPKV PEWERIVTEM QVVAERMVRG HYSVDAAAHE IDRRADRLLE KRRWMLDRGR
AL
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