Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Smed_2358 |
Symbol | |
ID | 5323219 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sinorhizobium medicae WSM419 |
Kingdom | Bacteria |
Replicon accession | NC_009636 |
Strand | - |
Start bp | 2433714 |
End bp | 2435039 |
Gene Length | 1326 bp |
Protein Length | 441 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 640791296 |
Product | extracellular solute-binding protein |
Protein accession | YP_001328025 |
Protein GI | 150397558 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACTTGA GAACTTTCCT GCTGGGCACG TGCTCGGCAG CCGCACTGGC CGGCTTGACT CACGCGGGCT GGGCCCAAGC GGAGACCCTG ACCATTGCCA CCGTGAACAA TGGCGACATG ATCCGGATGC AGAAGCTGAC GGACGATTTC ACGTCGAAGA ACCCGGACAT CCAACTCGAG TGGGTCACTC TTGAGGAAAA CGTCCTGCGC CAGCGCGTCA CGACGGACAT TGCGACCAAG GGCGGTCAGT ACGACATCAT GACGATCGGC ACCTATGAAG TGCCGATCTG GGCGAAACAG GGCTGGCTCC TGCCTCTGGA CAATCTCGGC CCCGAATACG ACGTAGACGA CCTTCTGCCG GCGATCCGCA GCGGCCTGAC CATCGATGGC AAGCTTTATG CCGCGCCCTT CTACGGCGAA AGCTCGATGG TCATGTATCG CAAGGACCTG TTCGAGAAGG CGGGTCTCAC CATGCCCGAT GCGCCGACCT GGGAATTCGT TGCCGAAGCG GCTCGCAAGA TCACCGACAA GAGCAACGAG ATCTACGGCA TCTGCCTTCG CGGAAAGGCT GGATGGGGCG AGAACATGGC CTTCCTGACG GCCACGGCAA ACGCCTTTGG CGCCCGCTGG TTCGATGAGA ACTGGAAGCC GCAATTCGAT CAGCCGGAGT GGAAGAACGC TCTCGACTTC TACGTCAAGC TGATGAATGA CGCCGGCCCC CCCGGTGCCT CGTCCAACGG CTTCAACGAA AACCTGTCGC TGTTCCAGAC CGGCAAGTGC GGGATGTGGA TCGACGCGAC CGTCGCCGCC TCCTTCGTCA CAAATCCGAA GGAGTCGACT GTCGCCGACA AGGTTGGTTT CGCGCTCGCT CCCGATACCG GCCTCGGAAA GCGCGGCAAC TGGCTCTGGG CCTGGAACCT CGCGGTTCCG GCGGGCACGC AGAAGGCCGA AGCGGCGCAG AAGTTCATCG CCTGGGCAAC GGGCAAGGAA TATCTGAATC TGGTTGCCGA GAAGGAGGGC TGGGCGAATG TTCCTCCCGG CACCCGCATC TCTCTCTATG AGAACCCGGA ATACCAGAAG GCGGCGCCCT TCGCGAAGAT GACGCTGGAC TCGATCAATG CGGCCGACCC GAAGAACCCG GCGGTGAAGC CGGTGCCATA TGTCGGCGTT CAGTTCGTGG CGATCCCGGA ATTCCAGGGC CTCGGCACGG CGGTCGGGCA GGTATTCTCG GCAGCTTTGG CCGGCCAGAT GAGCGTCGAC CAGGCACTCG CGAGCGCACA GCAGCTGTCG ACCCGCGAAA TGACCAAGGC CGGCTACATC AAGTGA
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Protein sequence | MNLRTFLLGT CSAAALAGLT HAGWAQAETL TIATVNNGDM IRMQKLTDDF TSKNPDIQLE WVTLEENVLR QRVTTDIATK GGQYDIMTIG TYEVPIWAKQ GWLLPLDNLG PEYDVDDLLP AIRSGLTIDG KLYAAPFYGE SSMVMYRKDL FEKAGLTMPD APTWEFVAEA ARKITDKSNE IYGICLRGKA GWGENMAFLT ATANAFGARW FDENWKPQFD QPEWKNALDF YVKLMNDAGP PGASSNGFNE NLSLFQTGKC GMWIDATVAA SFVTNPKEST VADKVGFALA PDTGLGKRGN WLWAWNLAVP AGTQKAEAAQ KFIAWATGKE YLNLVAEKEG WANVPPGTRI SLYENPEYQK AAPFAKMTLD SINAADPKNP AVKPVPYVGV QFVAIPEFQG LGTAVGQVFS AALAGQMSVD QALASAQQLS TREMTKAGYI K
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