| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Caci_5099 |
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| Symbol | |
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| ID | 8336453 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Catenulispora acidiphila DSM 44928 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013131 |
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| Strand | - |
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| Start bp | 5856207 |
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| End bp | 5857541 |
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| Gene Length | 1335 bp |
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| Protein Length | 444 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 644958198 |
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| Product | extracellular solute-binding protein family 1 |
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| Protein accession | YP_003115800 |
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| Protein GI | 256394236 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.291523 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0224239 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCGCACCA ACCTCATGAG GGGCACCGCC GCCCTCACCC TGGCCGTCAC CGCCATGGCG
ATGACCGCAT GCAGCAGTAG CAGCTCCTCC AGCTCCGCGC CCAAAGGCGG TGCCGCCAGC
AGCGGCTCGC ACGGCAAGGT GACCCTGTCC TTCGTCAACT GGGACGGCGG CATGCAGTCC
GCCGTCGACC AGTGGAACAA GGCGAACCCC GACATCCAGG TGCAGCTGAC CAAGCCCTCG
GGCACCGGCT ACACGCTCTA CAACAAGCTG ATCACCAACA ACGCCGCCGG CACCAACCCC
GACGTCACCG AGGTCGAGTA CCAGGCGCTC CCGGCGCTGA TCGCCAACAA GGTGATCGTG
CCGATCGACC AGTACGTCGG CGACATCTCC GCCGACTTCG ACAAGTCCTC GCTCGCGCAG
GTCCAGTTCG AGGGCAAGAC CTACGGCGTC CCGCAGAACG TCTGCCCGAT GGTCTTCTTC
TACCGCAAGG ACATCTTCGA CTCCCTCGGC CTGAAGGCGC CGACGACCTG GGACGAGTAC
GCCGCCGACG CCGCGACCAT CCACGCCAAG AACCCCAAGC AGTACATCGG CAACTTCTCG
GCCGTGGACT CCGGCTGGTT CGCCGGGCTC GCGCAGCAGG CCGGCGCCAA CTGGTGGACG
ACGACCGGGA CCACCTGGAA CGTCGCCATC GACGACGCGC CGACCCAGAA GGTCGCGAAC
TACTGGAGCG GCCTGATCGA CAAGGGTCTG GTCTCCCCGG AGCCGAACTG GTCCCCGCAG
TGGAACACCG ACATGAACAA CGGCACGATC ATCGGCTGGG TCAGCGCGCA GTGGGCGCCG
AACCAGTTCC CCTCGATCGC CAAGGACACC GCTGGCAAGT GGGTCGCCGC GGCGCTTCCG
GCCTGGACCG CTGGGGACTC CACGGTCGGC ATCTGGGGCG GGGAGACCGA GGCGGTGACC
TCGAACTCCA AGCACCCGGC CGAGGCCGCG AAGTTCGTGA AGTGGCTCAA CGCCTCCTCC
GACGGTGTCA AGACACTGAT CCAGCAGGTG GACGTCTTCC CGGCCTCGCT GGCCAACCAG
AGCCAGGACT CGCTGAAGAC CCCGCCGCCG TTCATGTCCG ACCAGGCGGA CTACAACACG
CTGATCGCCT CCGCGGCGAA GAACGCTCGC ACCTTCCAGG TCTGGGGACC GAACGCGAAC
GTCACCTTCG ACGCCTACTC CAACGACTTC GCCGCCGCGC TGCAGAACAA GACGCCGCTG
ACCGCGGCGC TGACGCAGAT GCAGCAGGCG ACCGTCGCCG ACCTGAAGAA GCGCGGCTTC
TCCGTCACCG GCTGA
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| Protein sequence | MRTNLMRGTA ALTLAVTAMA MTACSSSSSS SSAPKGGAAS SGSHGKVTLS FVNWDGGMQS
AVDQWNKANP DIQVQLTKPS GTGYTLYNKL ITNNAAGTNP DVTEVEYQAL PALIANKVIV
PIDQYVGDIS ADFDKSSLAQ VQFEGKTYGV PQNVCPMVFF YRKDIFDSLG LKAPTTWDEY
AADAATIHAK NPKQYIGNFS AVDSGWFAGL AQQAGANWWT TTGTTWNVAI DDAPTQKVAN
YWSGLIDKGL VSPEPNWSPQ WNTDMNNGTI IGWVSAQWAP NQFPSIAKDT AGKWVAAALP
AWTAGDSTVG IWGGETEAVT SNSKHPAEAA KFVKWLNASS DGVKTLIQQV DVFPASLANQ
SQDSLKTPPP FMSDQADYNT LIASAAKNAR TFQVWGPNAN VTFDAYSNDF AAALQNKTPL
TAALTQMQQA TVADLKKRGF SVTG
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