Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Bcav_0276 |
Symbol | |
ID | 7858583 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Beutenbergia cavernae DSM 12333 |
Kingdom | Bacteria |
Replicon accession | NC_012669 |
Strand | + |
Start bp | 299449 |
End bp | 300768 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 643864353 |
Product | extracellular solute-binding protein family 1 |
Protein accession | YP_002880303 |
Protein GI | 229818777 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.00588273 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 5 |
Fosmid unclonability p-value | 0.000015311 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGCGACGCA CCACCCCAGC GGTCGGCGCC CTCGCCGCAG CCGTCATGCT CGTCACCGCC GCCTGCTCCT CCGGAGGATC GTCCGGTGGG GACGGGGGAG ACGACGCCGC CTGGGCGCTC CCGGACGAGG ACCCCACGGC CACCGTCCAG GTGCTCGGCC ACCAGGACGC CGCCGACCTG CAGCCCGTGT TCGACGCGTT CAGCGAGGCC CACCCGAGCA TCACCGTCGA GTACGAGGCC GTCCCGTTCG ACCAGCTCAA CTCCGTGCTC GACGCCCGGA TCGCGAACAA GGACGGCAAC CCGGACGTGT ACTGGGCCGA CCAGCCGCGC ATCCCGGCGC TCTCGGCCCG GGGCTACGCC GAGGACATCA CGGAGCAGTT CGCGCCGGAC GCCGAGGCCT GGGACCCAGC GCCGCTCGAG TCGAGCTCGT TCGACGGCCA TCAGTGGGCG GTCCCGATCG CGAACTCGAC CCAGCTCCTC TACTACAACA AGGACCTGCT CGACGCCGCC GGGGCGGAGT ACCCCTCGGC CGCCGTGGAG GACCGCATGA CGTGGGAGGA GATCACCGAG CGCGCCGGCG CGGCGGTCGA CGCCGGCGCC CAGAACGGGC TGCTGTTCGG CCAGGTGAAC AGGTACTACC AGCTGCAGCC GCTCCCGATG TCGCTCGGCG GCTCGGCCGG CGGGACGGGC GAGGGGAACC TGACGCCGGA CGTCACGTCG GACGCCTGGG TCGAGGCCAT GACCTGGTAC GGGTCGCTCT TCGCTGACGG CCTGTCGCCG CAGGGTGTCG CGCCCGAGCA GTCGGACGCC GAGTTCCTCA CCGGGAACAC CGCCTACATG GTGCAGGGCC CGTGGCTGCT GCCGCAGCTG ACCGAGGCCG ACTTCGAGTG GGGCGTCGCC GCGCACCCGT ACTTCGAGGG CGGCGACGCC GTGACGCCGA CCGGATCGTG GTCGCTCGCG ATGAGCCCGT TCAGCGACGA CAAGGAGGCG GCCGCCGTCT TCATGCGCTG GATGTCGGTC GAGGAGGGCG GCGGCTACGC GGCCTACTAC GCCTCGCCGG AGCTTCCCGC GAACGTCGAG GGCAAGACGC AGTACTTCGA GCGCGAGGTC TTCGCGTCGC CGTCCGGCCA GGACGCCGTG TCGATCATCG ACGCCGAGAC GTCGACGACG GCGGTGCCGC GGCTGCAGAC GGTCGGGTAC GTGGAGTTCG AGGAGATCCT CGGGCGCGCG TTCTCCGACG TCGCGAACGG TGCGGATCCC GCAGGGGCGC TCGCGTCGGC GAGCTCCGAG CTCGAGACGG CGTGGGCGCA GTACCGGTGA
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Protein sequence | MRRTTPAVGA LAAAVMLVTA ACSSGGSSGG DGGDDAAWAL PDEDPTATVQ VLGHQDAADL QPVFDAFSEA HPSITVEYEA VPFDQLNSVL DARIANKDGN PDVYWADQPR IPALSARGYA EDITEQFAPD AEAWDPAPLE SSSFDGHQWA VPIANSTQLL YYNKDLLDAA GAEYPSAAVE DRMTWEEITE RAGAAVDAGA QNGLLFGQVN RYYQLQPLPM SLGGSAGGTG EGNLTPDVTS DAWVEAMTWY GSLFADGLSP QGVAPEQSDA EFLTGNTAYM VQGPWLLPQL TEADFEWGVA AHPYFEGGDA VTPTGSWSLA MSPFSDDKEA AAVFMRWMSV EEGGGYAAYY ASPELPANVE GKTQYFEREV FASPSGQDAV SIIDAETSTT AVPRLQTVGY VEFEEILGRA FSDVANGADP AGALASASSE LETAWAQYR
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