More than 300 homologs were found in PanDaTox collection
for query gene Bcav_0276 on replicon NC_012669
Organism: Beutenbergia cavernae DSM 12333



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Replicon accession

Locus tag

Product

% identity

Alignment on query gene

Alignment on homolog gene

Length

Bit score

E-value

Organism name

Kingdom

Plasmid clonability

Plasmid unclonability p-value

Fosmid clonability

Fosmid unclonability p-value

Coverage Plot

PanDaTox homologs

Experimental validation
NC_012669  Bcav_0276  extracellular solute-binding protein family 1  100 
 
 
439 aa  880    Beutenbergia cavernae DSM 12333  Bacteria  hitchhiker  0.00588273  hitchhiker  0.000015311 
 
 
-
 
NC_012852  Rleg_6156  extracellular solute-binding protein family 1  31.82 
 
 
410 aa  94.4  4e-18  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.889741  hitchhiker  0.000305646 
 
 
-
 
NC_011371  Rleg2_6572  extracellular solute-binding protein family 1  31.49 
 
 
410 aa  92.4  1e-17  Rhizobium leguminosarum bv. trifolii WSM2304  Bacteria  decreased coverage  0.00103217  normal  0.480926 
 
 
-
 
NC_009620  Smed_4916  extracellular solute-binding protein  30.89 
 
 
410 aa  92.8  1e-17  Sinorhizobium medicae WSM419  Bacteria  normal  0.06645  normal  0.512511 
 
 
-
 
NC_011899  Hore_20630  extracellular solute-binding protein family 1  27.67 
 
 
414 aa  87.8  3e-16  Halothermothrix orenii H 168  Bacteria  normal  n/a   
 
 
-
 
NC_010320  Teth514_0397  extracellular solute-binding protein  27.33 
 
 
428 aa  85.1  0.000000000000002  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_013595  Sros_3339  Maltose-binding periplasmic protein/domains- like protein  28.91 
 
 
431 aa  84.3  0.000000000000004  Streptosporangium roseum DSM 43021  Bacteria  normal  normal  0.202326 
 
 
-
 
NC_009953  Sare_0747  extracellular solute-binding protein  30.32 
 
 
433 aa  83.6  0.000000000000007  Salinispora arenicola CNS-205  Bacteria  normal  hitchhiker  0.00190936 
 
 
-
 
NC_009664  Krad_2164  extracellular solute-binding protein family 1  26.87 
 
 
435 aa  83.6  0.000000000000007  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013172  Bfae_12290  maltose-binding periplasmic protein  28.46 
 
 
422 aa  83.2  0.000000000000009  Brachybacterium faecium DSM 4810  Bacteria  normal  0.0134652  n/a   
 
 
-
 
NC_013159  Svir_11620  ABC-type sugar transport system, periplasmic component  27.87 
 
 
426 aa  82  0.00000000000002  Saccharomonospora viridis DSM 43017  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1511  extracellular solute-binding protein family 1  24.38 
 
 
424 aa  81.3  0.00000000000003  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013172  Bfae_06270  ABC-type sugar transport system, periplasmic component  27.09 
 
 
426 aa  81.6  0.00000000000003  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_010001  Cphy_0592  extracellular solute-binding protein  25.75 
 
 
456 aa  80.9  0.00000000000004  Clostridium phytofermentans ISDg  Bacteria  decreased coverage  0.000165278  n/a   
 
 
-
 
NC_010320  Teth514_2201  extracellular solute-binding protein  24.29 
 
 
420 aa  80.9  0.00000000000004  Thermoanaerobacter sp. X514  Bacteria  normal  0.455559  n/a   
 
 
-
 
NC_012669  Bcav_3572  extracellular solute-binding protein family 1  28.62 
 
 
427 aa  79.7  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.405751  normal 
 
 
-
 
NC_012669  Bcav_1680  extracellular solute-binding protein family 1  31.44 
 
 
430 aa  79  0.0000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.173253  normal 
 
 
-
 
NC_013235  Namu_0514  extracellular solute-binding protein family 1  27.3 
 
 
426 aa  79.3  0.0000000000001  Nakamurella multipartita DSM 44233  Bacteria  normal  normal 
 
 
-
 
NC_009664  Krad_2582  extracellular solute-binding protein family 1  27.96 
 
 
416 aa  79.3  0.0000000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal 
 
 
-
 
NC_013411  GYMC61_1727  extracellular solute-binding protein family 1  27.99 
 
 
422 aa  79  0.0000000000002  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_013739  Cwoe_4883  extracellular solute-binding protein family 1  28.29 
 
 
436 aa  78.2  0.0000000000003  Conexibacter woesei DSM 14684  Bacteria  normal  0.504344  normal 
 
 
-
 
NC_010320  Teth514_0753  extracellular solute-binding protein  24.43 
 
 
429 aa  77  0.0000000000006  Thermoanaerobacter sp. X514  Bacteria  hitchhiker  0.00037903  n/a   
 
 
-
 
NC_012669  Bcav_1522  extracellular solute-binding protein family 1  30.58 
 
 
421 aa  77  0.0000000000007  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.569671  normal 
 
 
-
 
NC_011988  Avi_5398  ABC transporter substrate binding protein (sugar)  28.14 
 
 
403 aa  76.6  0.0000000000007  Agrobacterium vitis S4  Bacteria  normal  0.14652  n/a   
 
 
-
 
NC_008699  Noca_4632  extracellular solute-binding protein  25.82 
 
 
419 aa  75.9  0.000000000001  Nocardioides sp. JS614  Bacteria  normal  0.448727  n/a   
 
 
-
 
NC_012669  Bcav_1655  extracellular solute-binding protein family 1  29.33 
 
 
425 aa  76.3  0.000000000001  Beutenbergia cavernae DSM 12333  Bacteria  normal  0.186521  normal  0.186231 
 
 
-
 
NC_013595  Sros_4988  extracellular solute-binding protein  25.42 
 
 
414 aa  75.9  0.000000000001  Streptosporangium roseum DSM 43021  Bacteria  normal  0.601947  normal 
 
 
-
 
NC_008541  Arth_3465  extracellular solute-binding protein  28.98 
 
 
411 aa  75.5  0.000000000002  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_008687  Pden_4181  extracellular solute-binding protein  26.4 
 
 
435 aa  75.9  0.000000000002  Paracoccus denitrificans PD1222  Bacteria  hitchhiker  0.000770865  normal  0.668736 
 
 
-
 
NC_014213  Mesil_3394  ABC-type sugar transport systems permease component  26.57 
 
 
411 aa  75.5  0.000000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.498756  normal  0.24931 
 
 
-
 
NC_012669  Bcav_0178  extracellular solute-binding protein family 1  28.23 
 
 
449 aa  75.9  0.000000000002  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013131  Caci_3595  extracellular solute-binding protein family 1  28.15 
 
 
428 aa  73.9  0.000000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.931004  normal 
 
 
-
 
NC_009668  Oant_3895  extracellular solute-binding protein  29.12 
 
 
411 aa  73.9  0.000000000005  Ochrobactrum anthropi ATCC 49188  Bacteria  normal  n/a   
 
 
-
 
NC_008044  TM1040_0431  extracellular solute-binding protein  26.04 
 
 
435 aa  73.6  0.000000000007  Ruegeria sp. TM1040  Bacteria  normal  normal 
 
 
-
 
NC_010816  BLD_1060  MalE-type ABC sugar transport system periplasmic component  25.51 
 
 
408 aa  73.2  0.000000000009  Bifidobacterium longum DJO10A  Bacteria  normal  0.065415  n/a   
 
 
-
 
NC_012669  Bcav_3712  extracellular solute-binding protein family 1  27.69 
 
 
421 aa  73.2  0.000000000009  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal  0.411366 
 
 
-
 
NC_013172  Bfae_01810  ABC-type sugar transport system, periplasmic component  26.74 
 
 
415 aa  72.4  0.00000000001  Brachybacterium faecium DSM 4810  Bacteria  normal  n/a   
 
 
-
 
NC_009939  Dgeo_2919  ABC-type sugar transport system, periplasmic component  28.72 
 
 
407 aa  72.8  0.00000000001  Deinococcus geothermalis DSM 11300  Bacteria  n/a    n/a   
 
 
-
 
NC_010003  Pmob_0954  extracellular solute-binding protein  24.76 
 
 
399 aa  73.2  0.00000000001  Petrotoga mobilis SJ95  Bacteria  normal  0.0450213  n/a   
 
 
-
 
NC_009664  Krad_0385  extracellular solute-binding protein family 1  26.03 
 
 
410 aa  72.8  0.00000000001  Kineococcus radiotolerans SRS30216  Bacteria  normal  normal  0.0390662 
 
 
-
 
NC_013124  Afer_1331  extracellular solute-binding protein family 1  25.44 
 
 
464 aa  71.2  0.00000000003  Acidimicrobium ferrooxidans DSM 10331  Bacteria  normal  n/a   
 
 
-
 
NC_013947  Snas_5891  extracellular solute-binding protein family 1  25.08 
 
 
402 aa  71.6  0.00000000003  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  normal  0.403986 
 
 
-
 
NC_013131  Caci_6904  extracellular solute-binding protein family 1  26.29 
 
 
404 aa  71.6  0.00000000003  Catenulispora acidiphila DSM 44928  Bacteria  decreased coverage  0.000382644  hitchhiker  0.00751503 
 
 
-
 
NC_010002  Daci_5596  extracellular solute-binding protein  25.39 
 
 
436 aa  71.2  0.00000000004  Delftia acidovorans SPH-1  Bacteria  normal  0.198436  normal  0.412169 
 
 
-
 
NC_014212  Mesil_1015  extracellular solute-binding protein family 1  24.71 
 
 
418 aa  70.9  0.00000000005  Meiothermus silvanus DSM 9946  Bacteria  normal  0.706197  normal  0.535113 
 
 
-
 
NC_013411  GYMC61_2959  extracellular solute-binding protein family 1  23.92 
 
 
437 aa  70.9  0.00000000005  Geobacillus sp. Y412MC61  Bacteria  n/a    n/a   
 
 
-
 
NC_010001  Cphy_1529  extracellular solute-binding protein  23.12 
 
 
439 aa  70.9  0.00000000005  Clostridium phytofermentans ISDg  Bacteria  normal  n/a   
 
 
-
 
NC_004311  BRA0748  sugar ABC transporter, periplasmic sugar-binding protein, putative  27.72 
 
 
411 aa  70.5  0.00000000006  Brucella suis 1330  Bacteria  normal  0.537127  n/a   
 
 
-
 
NC_003909  BCE_1899  extracellular solute-binding protein, putative  24.41 
 
 
416 aa  70.1  0.00000000008  Bacillus cereus ATCC 10987  Bacteria  normal  0.41529  n/a   
 
 
-
 
NC_006274  BCZK1634  sugar ABC transporter, sugar-binding protein  24.58 
 
 
416 aa  69.7  0.00000000009  Bacillus cereus E33L  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_2108  extracellular solute-binding protein family 1  27.85 
 
 
430 aa  69.3  0.0000000001  Catenulispora acidiphila DSM 44928  Bacteria  normal  normal  0.553068 
 
 
-
 
NC_011981  Avi_7590  ABC transporter substrate binding protein (sugar)  26.15 
 
 
447 aa  69.3  0.0000000001  Agrobacterium vitis S4  Bacteria  normal  n/a   
 
 
-
 
NC_008262  CPR_0904  ABC transporter, periplasmic substrate-binding protein, putative  23.64 
 
 
439 aa  68.9  0.0000000001  Clostridium perfringens SM101  Bacteria  decreased coverage  0.00221898  n/a   
 
 
-
 
NC_011881  Achl_4621  extracellular solute-binding protein family 1  27.33 
 
 
413 aa  69.3  0.0000000001  Arthrobacter chlorophenolicus A6  Bacteria  n/a    normal 
 
 
-
 
NC_009504  BOV_A0698  putative sugar ABC transporter, periplasmic sugar-binding protein  27.6 
 
 
366 aa  69.3  0.0000000001  Brucella ovis ATCC 25840  Bacteria  normal  0.436581  n/a   
 
 
-
 
NC_009565  TBFG_12341  periplasmic sugar-binding lipoprotein uspC  25.64 
 
 
440 aa  69.3  0.0000000001  Mycobacterium tuberculosis F11  Bacteria  normal  normal 
 
 
-
 
NC_008010  Dgeo_2870  extracellular solute-binding protein  23.01 
 
 
447 aa  68.9  0.0000000002  Deinococcus geothermalis DSM 11300  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_4697  extracellular solute-binding protein family 1  25.99 
 
 
442 aa  68.6  0.0000000002  Catenulispora acidiphila DSM 44928  Bacteria  hitchhiker  0.00367387  normal 
 
 
-
 
NC_009380  Strop_0803  extracellular solute-binding protein  27.22 
 
 
433 aa  68.6  0.0000000002  Salinispora tropica CNB-440  Bacteria  normal  0.437157  normal 
 
 
-
 
NC_009616  Tmel_0596  extracellular solute-binding protein  25.5 
 
 
390 aa  68.9  0.0000000002  Thermosipho melanesiensis BI429  Bacteria  decreased coverage  0.00439649  n/a   
 
 
-
 
NC_007333  Tfu_0832  multiple sugar transport system substrate-binding protein  24.2 
 
 
416 aa  68.2  0.0000000003  Thermobifida fusca YX  Bacteria  normal  0.669088  n/a   
 
 
-
 
NC_013205  Aaci_0913  extracellular solute-binding protein family 1  25.09 
 
 
421 aa  67.8  0.0000000003  Alicyclobacillus acidocaldarius subsp. acidocaldarius DSM 446  Bacteria  normal  n/a   
 
 
-
 
NC_013521  Sked_03090  ABC-type sugar transport system, periplasmic component  25.71 
 
 
419 aa  67.8  0.0000000003  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.033461  normal 
 
 
-
 
NC_013131  Caci_2611  extracellular solute-binding protein family 1  24.49 
 
 
453 aa  68.2  0.0000000003  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.058641  normal 
 
 
-
 
NC_014211  Ndas_4930  extracellular solute-binding protein family 1  30.85 
 
 
419 aa  67.4  0.0000000004  Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111  Bacteria  normal  0.265943  normal 
 
 
-
 
NC_010003  Pmob_1492  extracellular solute-binding protein  26.46 
 
 
421 aa  67.8  0.0000000004  Petrotoga mobilis SJ95  Bacteria  normal  n/a   
 
 
-
 
NC_011884  Cyan7425_3276  extracellular solute-binding protein family 1  25.74 
 
 
420 aa  67.8  0.0000000004  Cyanothece sp. PCC 7425  Bacteria  normal  0.147153  normal  0.336546 
 
 
-
 
NC_011661  Dtur_0381  extracellular solute-binding protein family 1  25.57 
 
 
421 aa  67.4  0.0000000005  Dictyoglomus turgidum DSM 6724  Bacteria  normal  n/a   
 
 
-
 
NC_013131  Caci_7906  extracellular solute-binding protein family 1  30 
 
 
420 aa  67.4  0.0000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.819994  normal 
 
 
-
 
NC_012791  Vapar_1108  extracellular solute-binding protein family 1  24.49 
 
 
436 aa  67.4  0.0000000005  Variovorax paradoxus S110  Bacteria  normal  0.633554  n/a   
 
 
-
 
NC_013131  Caci_4320  extracellular solute-binding protein family 1  26.05 
 
 
425 aa  67.4  0.0000000005  Catenulispora acidiphila DSM 44928  Bacteria  normal  0.811375  hitchhiker  0.00841489 
 
 
-
 
NC_010001  Cphy_2308  extracellular solute-binding protein  26.8 
 
 
440 aa  67  0.0000000006  Clostridium phytofermentans ISDg  Bacteria  hitchhiker  0.000000253431  n/a   
 
 
-
 
NC_007963  Csal_0633  extracellular solute-binding protein  24.19 
 
 
436 aa  67  0.0000000006  Chromohalobacter salexigens DSM 3043  Bacteria  normal  0.131479  n/a   
 
 
-
 
NC_010816  BLD_1008  MalE-type ABC sugar transport system periplasmic component  25.07 
 
 
449 aa  67  0.0000000007  Bifidobacterium longum DJO10A  Bacteria  normal  n/a   
 
 
-
 
NC_012848  Rleg_5048  extracellular solute-binding protein family 1  25.15 
 
 
424 aa  66.6  0.0000000008  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  0.133709  normal 
 
 
-
 
NC_010320  Teth514_1099  extracellular solute-binding protein  25.32 
 
 
457 aa  66.6  0.0000000008  Thermoanaerobacter sp. X514  Bacteria  normal  n/a   
 
 
-
 
NC_007413  Ava_4289  extracellular solute-binding protein  24.37 
 
 
466 aa  66.2  0.000000001  Anabaena variabilis ATCC 29413  Bacteria  normal  normal 
 
 
-
 
NC_008262  CPR_0476  ABC transporter, substrate-binding protein  23.05 
 
 
427 aa  65.9  0.000000001  Clostridium perfringens SM101  Bacteria  normal  n/a   
 
 
-
 
NC_009428  Rsph17025_1681  extracellular solute-binding protein  26.26 
 
 
436 aa  66.2  0.000000001  Rhodobacter sphaeroides ATCC 17025  Bacteria  normal  0.901925  normal 
 
 
-
 
NC_009654  Mmwyl1_1094  extracellular solute-binding protein  23.9 
 
 
439 aa  65.9  0.000000001  Marinomonas sp. MWYL1  Bacteria  normal  0.962008  normal  0.028756 
 
 
-
 
NC_014158  Tpau_1269  extracellular solute-binding protein family 1  28.32 
 
 
412 aa  65.9  0.000000002  Tsukamurella paurometabola DSM 20162  Bacteria  normal  n/a   
 
 
-
 
NC_013530  Xcel_2797  extracellular solute-binding protein family 1  24.18 
 
 
426 aa  65.1  0.000000002  Xylanimonas cellulosilytica DSM 15894  Bacteria  normal  n/a   
 
 
-
 
NC_014213  Mesil_3226  Transcriptional regulator  26.24 
 
 
410 aa  65.1  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  0.101031  normal 
 
 
-
 
NC_014213  Mesil_3422  ABC-type sugar transport systems permease component  26.24 
 
 
410 aa  65.1  0.000000002  Meiothermus silvanus DSM 9946  Bacteria  normal  normal 
 
 
-
 
NC_013526  Tter_2218  extracellular solute-binding protein family 1  25.4 
 
 
479 aa  65.9  0.000000002  Thermobaculum terrenum ATCC BAA-798  Bacteria  hitchhiker  0.00910899  n/a   
 
 
-
 
NC_008541  Arth_3146  extracellular solute-binding protein  25.58 
 
 
424 aa  65.9  0.000000002  Arthrobacter sp. FB24  Bacteria  normal  0.0629231  n/a   
 
 
-
 
NC_012848  Rleg_4940  extracellular solute-binding protein family 1  22.57 
 
 
484 aa  65.5  0.000000002  Rhizobium leguminosarum bv. trifolii WSM1325  Bacteria  normal  normal 
 
 
-
 
NC_013521  Sked_02930  carbohydrate-binding protein  25.13 
 
 
426 aa  65.5  0.000000002  Sanguibacter keddieii DSM 10542  Bacteria  normal  normal 
 
 
-
 
NC_011831  Cagg_2267  extracellular solute-binding protein family 1  25.08 
 
 
445 aa  64.7  0.000000003  Chloroflexus aggregans DSM 9485  Bacteria  normal  hitchhiker  0.00064551 
 
 
-
 
NC_008541  Arth_3687  extracellular solute-binding protein  22.55 
 
 
453 aa  64.7  0.000000003  Arthrobacter sp. FB24  Bacteria  normal  n/a   
 
 
-
 
NC_004578  PSPTO_0364  sugar ABC transporter, periplasmic sugar-binding protein, putative  24.47 
 
 
438 aa  64.3  0.000000004  Pseudomonas syringae pv. tomato str. DC3000  Bacteria  normal  n/a   
 
 
-
 
NC_008261  CPF_2652  putative maltose/maltodextrin ABC transporter, maltose/maltodextrin-binding protein  22.91 
 
 
408 aa  64.3  0.000000004  Clostridium perfringens ATCC 13124  Bacteria  normal  n/a   
 
 
-
 
NC_008786  Veis_3171  extracellular solute-binding protein  24.37 
 
 
443 aa  64.3  0.000000004  Verminephrobacter eiseniae EF01-2  Bacteria  normal  0.0465993  normal 
 
 
-
 
NC_012669  Bcav_0137  extracellular solute-binding protein family 1  25.85 
 
 
453 aa  64.3  0.000000004  Beutenbergia cavernae DSM 12333  Bacteria  normal  normal 
 
 
-
 
NC_013947  Snas_2758  extracellular solute-binding protein family 1  25.43 
 
 
423 aa  64.3  0.000000004  Stackebrandtia nassauensis DSM 44728  Bacteria  normal  0.736779  normal 
 
 
-
 
NC_013521  Sked_21150  carbohydrate-binding protein  26.58 
 
 
428 aa  64.3  0.000000004  Sanguibacter keddieii DSM 10542  Bacteria  normal  0.396929  normal  0.174783 
 
 
-
 
NC_013595  Sros_9091  ABC-type sugar transport system periplasmic component-like protein  27.75 
 
 
422 aa  63.9  0.000000005  Streptosporangium roseum DSM 43021  Bacteria  normal  0.306335  normal 
 
 
-
 
NC_009620  Smed_3812  extracellular solute-binding protein  27.59 
 
 
423 aa  63.9  0.000000005  Sinorhizobium medicae WSM419  Bacteria  normal  0.353807  normal 
 
 
-
 
NC_007493  RSP_0091  ABC sorbitol/mannitol transporter, periplasmic binding protein  25.68 
 
 
436 aa  63.9  0.000000006  Rhodobacter sphaeroides 2.4.1  Bacteria  normal  0.126585  n/a   
 
 
-
 
NC_013739  Cwoe_5802  extracellular solute-binding protein family 1  26.17 
 
 
444 aa  63.5  0.000000006  Conexibacter woesei DSM 14684  Bacteria  normal  normal  0.0809589 
 
 
-
 
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