| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Tfu_0832 |
|---|
| Symbol | |
|---|
| ID | 3579401 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Thermobifida fusca YX |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007333 |
|---|
| Strand | - |
|---|
| Start bp | 985784 |
|---|
| End bp | 987034 |
|---|
| Gene Length | 1251 bp |
|---|
| Protein Length | 416 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | 637684525 |
|---|
| Product | multiple sugar transport system substrate-binding protein |
|---|
| Protein accession | YP_288893 |
|---|
| Protein GI | 72161236 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2182] Maltose-binding periplasmic proteins/domains |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 0.669088 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTTCC GTAGCTTCAG CGTGTTGTCG GGCATAGCAG TCCTGACACT GCTTGCCACC
GCGTGTGGCG GCGGAGGCGA CGACAGCGCG TCCTCCGAGC AGTCCACCGA CGGTGCCATG
GTCATCTGGG CTGACCCCAA CCGCACCGAT GTGCTGATCC CCTACGCGGA ACGATTCGGT
GAGGCCCACG GCATCACCGT GAAAGTCGAA TCCATCCCGA ACGAAGACCT CCAAGACAAC
TTCGTCACCG CACACCAGGC AGGATCCCCG CCCGACCTGG TCGTGGGCGC CCACGACTGG
ACCGGCAACC TCGTCCGCAA CGGCGCCATC GACCCCGTCC AGCTCCCCCA GGAGGTTGCC
GACGGATTCG AACAAGTCGC CCTCGACGCG GTGACGTTCG AAGGCCAGCT CTACGGCGTG
CCCTACGCCA TGGAGAACCT GGTGCTCTTC CGCAACACCG ACCTTGCCCC CGAAGCCCCC
GACACCATTG AAGAGCTCAT CAAGGAAGGC AAGAAGCTCA AAGAGAGCGG CAAGGTCGAA
GAGATCATGA GCCTCCAGGT GGGCTCGGAA GGCGACGCCT ACCACATCTA CCCGCTGTAC
ACCTCCGCGG GCGGCTACCT GTTCGGCAAG GACGACGAAG GCAACCTCGA CCCCTCCGAC
ATGGGTGTGG GCTCGGAATC CTCCATCAAG GCGTTCGAGA AGATCGCGGA ACTCGGCGAG
AAGGGCGAAG GCGCGCTCAA GCGCTCCATC GACAGCCAGA ACGCCGGCCC CCTGTTCAAC
GAAGCGAAGA CCGCCTTCCT CATCTCCGGC CCGTGGGCGA TCGCAGACAT GAAGGAAGCG
GGCATCCCCT ACGAGATCAG CCCGGTTCCC GGCTTCGCGA ACGGAGACAA AGCGCGCCCG
TTCATCGGCG TCCAAGCGTT CTTCGTGGCT TCCGGCGGCG CCAACAAGGT CTTCGCCCAG
GAGTTCGCCA CCAACTTCGT GACCGAGACC GAACTGGCCG TCGCCCTGTA CGAGGCCGAC
CCCCGTCCCC CGGCGCTGAC CGCCGCCCTG GAAAAGGTCT CCGCCGACGA CCCCGACCTG
CTCAAGATCG TCGAGGCCGG CGCCAACGGC GACCCGCTGC CCGCCATCCC CGAAATGGCC
GCGATCTGGG GCCCGTTCGG GCAGGCCGAG GCCGCGGTGA TCGCCGGTGA GGACGTCGCC
GAGGCCGTCA AGGCCGCGGG TGAGGCCATC TCCGAGCAGA TCGGCGGTTG A
|
|---|
| Protein sequence | MKFRSFSVLS GIAVLTLLAT ACGGGGDDSA SSEQSTDGAM VIWADPNRTD VLIPYAERFG
EAHGITVKVE SIPNEDLQDN FVTAHQAGSP PDLVVGAHDW TGNLVRNGAI DPVQLPQEVA
DGFEQVALDA VTFEGQLYGV PYAMENLVLF RNTDLAPEAP DTIEELIKEG KKLKESGKVE
EIMSLQVGSE GDAYHIYPLY TSAGGYLFGK DDEGNLDPSD MGVGSESSIK AFEKIAELGE
KGEGALKRSI DSQNAGPLFN EAKTAFLISG PWAIADMKEA GIPYEISPVP GFANGDKARP
FIGVQAFFVA SGGANKVFAQ EFATNFVTET ELAVALYEAD PRPPALTAAL EKVSADDPDL
LKIVEAGANG DPLPAIPEMA AIWGPFGQAE AAVIAGEDVA EAVKAAGEAI SEQIGG
|
|---|
| |