Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Daci_5596 |
Symbol | |
ID | 5751216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Delftia acidovorans SPH-1 |
Kingdom | Bacteria |
Replicon accession | NC_010002 |
Strand | - |
Start bp | 6222574 |
End bp | 6223884 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 641300729 |
Product | extracellular solute-binding protein |
Protein accession | YP_001566610 |
Protein GI | 160901028 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1653] ABC-type sugar transport system, periplasmic component |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.198436 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 30 |
Fosmid unclonability p-value | 0.412169 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCACAGCT TGCTCAAGGC CAGCCTCACA TGGGCCATGG CCACTGCCGC AGCGGGCGCA CTCGCCGGCA CCGAACTCGT GATCGCCACC GTGAACAACG GCCACATGAT CGAGATGCAA AAGCTCACCC CCCGGTTCGA GAAGGCCCAC CCCGACATCA CGCTCAAATG GGTGACGCTG GAAGAAGGCG TGCTGCGCCA GCGCGTGACC ACCGACATCG CCACCAAGGG CGGCCAGTTC GATGTGATGA CCGTGGGCAT CTACGAGGTG CCGATCTGGT CGAAGAAGGG CTGGCTGCAG CCCATTGCCA CCGATGCCGC CTATGACGCG GCCGACCTGC TGCCCACCAT CCGCGAAGGC CTGTCCTACG AAGGCAAGCT CTATGCCTCG CCCTTCTATG GCGAAGGTTC CATCCTCATG TACCGCAAGG ACCTGGCCGA CAAGGCGGGT TTTCAGATGC CCGACAAGCC CACCTGGGAG CAGGTCCGGG AGTTCGCCTC CAGGGTCCAC GATCCCAAGG CCGGGGTCTA CGGCATCTGC CTGCGCGGCA AGCCGGGCTG GGGAGACAAC ATGGCCCTGA TCACCACCAT GGCCAATACC TTCGGCGGCC AATGGTTCGA CATGCAGTGG AGGCCGCAGA TCGATACACC CGCCTGGAAG AAGGCCGTGG GTTTCTATGT GGACCTGATG AAGGCCTATG GCCCCCCGGG CGCCTCGGCC AACAGCTTCA ATGAGAACCT GGCCCTGTTC AACGAGGGCA AGTGCGGCGC CTGGGTGGAT GCGAGCATCG CCGCCTCCTT CGTGAGCGAC CCCAAGCAAT CCAAGGTGGC CGACAAGGTG GCCTATGCGG CTGCACCCGT GGCCAGCACG CCCAAGGGAT CGACCTGGCT GTGGACCTGG AACCTGGCCA TACCCTCCAG CTCGAAGAAG GCCGATGCGG CCCAGGTCTT CGTGAAGTGG GCCACCTCCA GGGAGTATGT GCAGTTGGTT GCGCAGGAGC ACGGCTGGCG TGCCGTGCCT ACAGGAACGC GCCAGTCCAC CTATGCCAAT GCCGAGTTCC AGAAGGTGGC GGGCTTTGCC GCAGCCGAGA AGCGGGCCAT CGACAGCGTG AGCCTGACCG ATGCGACCGA GCCCAAGTCG CCCTATGCCG GCGTGCAGTA CGTCGCGATT CCAGAGTTCC AGGCCATTGG CATTGCCGTG GGCCAGCAGA TGAGCGCCGC GCTGTCGGGC AAGGTCACGG TGGAGCAGGC GCTCAGTACC TCGCAGACGC TGGCCGATCG CGAGATGAGG AAAAGCGGCT ACTACAAATG A
|
Protein sequence | MHSLLKASLT WAMATAAAGA LAGTELVIAT VNNGHMIEMQ KLTPRFEKAH PDITLKWVTL EEGVLRQRVT TDIATKGGQF DVMTVGIYEV PIWSKKGWLQ PIATDAAYDA ADLLPTIREG LSYEGKLYAS PFYGEGSILM YRKDLADKAG FQMPDKPTWE QVREFASRVH DPKAGVYGIC LRGKPGWGDN MALITTMANT FGGQWFDMQW RPQIDTPAWK KAVGFYVDLM KAYGPPGASA NSFNENLALF NEGKCGAWVD ASIAASFVSD PKQSKVADKV AYAAAPVAST PKGSTWLWTW NLAIPSSSKK ADAAQVFVKW ATSREYVQLV AQEHGWRAVP TGTRQSTYAN AEFQKVAGFA AAEKRAIDSV SLTDATEPKS PYAGVQYVAI PEFQAIGIAV GQQMSAALSG KVTVEQALST SQTLADREMR KSGYYK
|
| |